RNA–Protein interactions for RNA: ENST00000561530.5

CARHSP1-203, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CARHSP1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-203ENST00000561530 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.25
CARHSP1-203ENST00000561530 CCDC180Q9P1Z9 1646 aa31.74■■■□□ 2.67
CARHSP1-203ENST00000561530 ABCC9O60706 1549 aa31.44■■■□□ 2.62
CARHSP1-203ENST00000561530 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
CARHSP1-203ENST00000561530 NACADO15069 1562 aa29.91■■■□□ 2.38
CARHSP1-203ENST00000561530 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
CARHSP1-203ENST00000561530 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
CARHSP1-203ENST00000561530 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
CARHSP1-203ENST00000561530 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
CARHSP1-203ENST00000561530 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
CARHSP1-203ENST00000561530 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
CARHSP1-203ENST00000561530 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
CARHSP1-203ENST00000561530 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
CARHSP1-203ENST00000561530 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
CARHSP1-203ENST00000561530 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
CARHSP1-203ENST00000561530 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
CARHSP1-203ENST00000561530 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
CARHSP1-203ENST00000561530 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
CARHSP1-203ENST00000561530 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
CARHSP1-203ENST00000561530 SMARCA4P51532 1647 aa27.56■■■□□ 2
CARHSP1-203ENST00000561530 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
CARHSP1-203ENST00000561530 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
CARHSP1-203ENST00000561530 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
CARHSP1-203ENST00000561530 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
CARHSP1-203ENST00000561530 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
CARHSP1-203ENST00000561530 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
CARHSP1-203ENST00000561530 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
CARHSP1-203ENST00000561530 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
CARHSP1-203ENST00000561530 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
CARHSP1-203ENST00000561530 CUX2O14529 1486 aa27.13■■□□□ 1.93
CARHSP1-203ENST00000561530 NESP48681 1621 aa27.06■■□□□ 1.92
CARHSP1-203ENST00000561530 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
CARHSP1-203ENST00000561530 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
CARHSP1-203ENST00000561530 WIZO95785 1651 aa26.89■■□□□ 1.9
CARHSP1-203ENST00000561530 DNAJC5Q9H3Z4 198 aa26.87■■□□□ 1.89
CARHSP1-203ENST00000561530 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
CARHSP1-203ENST00000561530 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
CARHSP1-203ENST00000561530 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
CARHSP1-203ENST00000561530 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
CARHSP1-203ENST00000561530 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
CARHSP1-203ENST00000561530 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
CARHSP1-203ENST00000561530 WDR62O43379 1518 aa26.5■■□□□ 1.83
CARHSP1-203ENST00000561530 CFTRP13569 1480 aa26.48■■□□□ 1.83
CARHSP1-203ENST00000561530 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
CARHSP1-203ENST00000561530 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
CARHSP1-203ENST00000561530 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
CARHSP1-203ENST00000561530 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
CARHSP1-203ENST00000561530 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
CARHSP1-203ENST00000561530 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
CARHSP1-203ENST00000561530 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
CARHSP1-203ENST00000561530 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
CARHSP1-203ENST00000561530 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
CARHSP1-203ENST00000561530 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
CARHSP1-203ENST00000561530 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
CARHSP1-203ENST00000561530 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
CARHSP1-203ENST00000561530 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
CARHSP1-203ENST00000561530 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
CARHSP1-203ENST00000561530 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
CARHSP1-203ENST00000561530 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
CARHSP1-203ENST00000561530 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.697e-8■■■■■ 41.3
CARHSP1-203ENST00000561530 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
CARHSP1-203ENST00000561530 CHD1O14646 1710 aa25.56■■□□□ 1.68
CARHSP1-203ENST00000561530 CUX1P39880 1505 aa25.56■■□□□ 1.68
CARHSP1-203ENST00000561530 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
CARHSP1-203ENST00000561530 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
CARHSP1-203ENST00000561530 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
CARHSP1-203ENST00000561530 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
CARHSP1-203ENST00000561530 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
CARHSP1-203ENST00000561530 SOGA1O94964 1423 aa25.54■■□□□ 1.68
CARHSP1-203ENST00000561530 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
CARHSP1-203ENST00000561530 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
CARHSP1-203ENST00000561530 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
CARHSP1-203ENST00000561530 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
CARHSP1-203ENST00000561530 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
CARHSP1-203ENST00000561530 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
CARHSP1-203ENST00000561530 FBLN2P98095 1184 aa25.32■■□□□ 1.64
CARHSP1-203ENST00000561530 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
CARHSP1-203ENST00000561530 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
CARHSP1-203ENST00000561530 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
CARHSP1-203ENST00000561530 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
CARHSP1-203ENST00000561530 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
CARHSP1-203ENST00000561530 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
CARHSP1-203ENST00000561530 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
CARHSP1-203ENST00000561530 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
CARHSP1-203ENST00000561530 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
CARHSP1-203ENST00000561530 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
CARHSP1-203ENST00000561530 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
CARHSP1-203ENST00000561530 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
CARHSP1-203ENST00000561530 EEA1Q15075 1411 aa25.14■■□□□ 1.62
CARHSP1-203ENST00000561530 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
CARHSP1-203ENST00000561530 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
CARHSP1-203ENST00000561530 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
CARHSP1-203ENST00000561530 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
CARHSP1-203ENST00000561530 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
CARHSP1-203ENST00000561530 NUP160Q12769 1436 aa24.95■■□□□ 1.58
CARHSP1-203ENST00000561530 CEP170Q5SW79 1584 aa24.94■■□□□ 1.58
CARHSP1-203ENST00000561530 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
CARHSP1-203ENST00000561530 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
CARHSP1-203ENST00000561530 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
CARHSP1-203ENST00000561530 SHROOM2Q13796 1616 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms