RNA–Protein interactions for RNA: ENST00000464134.1

LAMA5-205, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-205ENST00000464134 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
LAMA5-205ENST00000464134 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
LAMA5-205ENST00000464134 ABCC9O60706 1549 aa28.43■■■□□ 2.14
LAMA5-205ENST00000464134 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
LAMA5-205ENST00000464134 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
LAMA5-205ENST00000464134 NACADO15069 1562 aa26.99■■□□□ 1.91
LAMA5-205ENST00000464134 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
LAMA5-205ENST00000464134 ZCCHC6Q5VYS8 1495 aaKnown RBP26.88■■□□□ 1.89
LAMA5-205ENST00000464134 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
LAMA5-205ENST00000464134 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
LAMA5-205ENST00000464134 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
LAMA5-205ENST00000464134 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
LAMA5-205ENST00000464134 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
LAMA5-205ENST00000464134 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
LAMA5-205ENST00000464134 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
LAMA5-205ENST00000464134 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
LAMA5-205ENST00000464134 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
LAMA5-205ENST00000464134 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
LAMA5-205ENST00000464134 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
LAMA5-205ENST00000464134 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
LAMA5-205ENST00000464134 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
LAMA5-205ENST00000464134 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
LAMA5-205ENST00000464134 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
LAMA5-205ENST00000464134 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
LAMA5-205ENST00000464134 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
LAMA5-205ENST00000464134 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
LAMA5-205ENST00000464134 WIZO95785 1651 aa24.79■■□□□ 1.56
LAMA5-205ENST00000464134 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
LAMA5-205ENST00000464134 NESP48681 1621 aa24.64■■□□□ 1.53
LAMA5-205ENST00000464134 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
LAMA5-205ENST00000464134 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
LAMA5-205ENST00000464134 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
LAMA5-205ENST00000464134 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
LAMA5-205ENST00000464134 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
LAMA5-205ENST00000464134 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
LAMA5-205ENST00000464134 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
LAMA5-205ENST00000464134 CUX2O14529 1486 aa24.12■■□□□ 1.45
LAMA5-205ENST00000464134 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
LAMA5-205ENST00000464134 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
LAMA5-205ENST00000464134 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
LAMA5-205ENST00000464134 CFTRP13569 1480 aa24.02■■□□□ 1.44
LAMA5-205ENST00000464134 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
LAMA5-205ENST00000464134 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
LAMA5-205ENST00000464134 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
LAMA5-205ENST00000464134 WDR62O43379 1518 aa23.93■■□□□ 1.42
LAMA5-205ENST00000464134 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
LAMA5-205ENST00000464134 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
LAMA5-205ENST00000464134 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
LAMA5-205ENST00000464134 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
LAMA5-205ENST00000464134 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
LAMA5-205ENST00000464134 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
LAMA5-205ENST00000464134 CUX1P39880 1505 aa23.45■■□□□ 1.34
LAMA5-205ENST00000464134 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
LAMA5-205ENST00000464134 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
LAMA5-205ENST00000464134 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
LAMA5-205ENST00000464134 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
LAMA5-205ENST00000464134 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
LAMA5-205ENST00000464134 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
LAMA5-205ENST00000464134 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
LAMA5-205ENST00000464134 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
LAMA5-205ENST00000464134 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.322e-8■■■□□ 18.3
LAMA5-205ENST00000464134 CHD1O14646 1710 aa23.25■■□□□ 1.31
LAMA5-205ENST00000464134 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
LAMA5-205ENST00000464134 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
LAMA5-205ENST00000464134 SOGA1O94964 1423 aa23.18■■□□□ 1.3
LAMA5-205ENST00000464134 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
LAMA5-205ENST00000464134 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
LAMA5-205ENST00000464134 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
LAMA5-205ENST00000464134 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
LAMA5-205ENST00000464134 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
LAMA5-205ENST00000464134 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
LAMA5-205ENST00000464134 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
LAMA5-205ENST00000464134 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
LAMA5-205ENST00000464134 FBLN2P98095 1184 aa23.03■■□□□ 1.28
LAMA5-205ENST00000464134 ABCA10Q8WWZ4 1543 aa23.02■■□□□ 1.28
LAMA5-205ENST00000464134 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
LAMA5-205ENST00000464134 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
LAMA5-205ENST00000464134 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
LAMA5-205ENST00000464134 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
LAMA5-205ENST00000464134 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
LAMA5-205ENST00000464134 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
LAMA5-205ENST00000464134 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
LAMA5-205ENST00000464134 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
LAMA5-205ENST00000464134 CLASP1Q7Z460 1538 aa22.86■■□□□ 1.25
LAMA5-205ENST00000464134 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
LAMA5-205ENST00000464134 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
LAMA5-205ENST00000464134 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
LAMA5-205ENST00000464134 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
LAMA5-205ENST00000464134 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
LAMA5-205ENST00000464134 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
LAMA5-205ENST00000464134 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
LAMA5-205ENST00000464134 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
LAMA5-205ENST00000464134 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
LAMA5-205ENST00000464134 NUP160Q12769 1436 aa22.6■■□□□ 1.21
LAMA5-205ENST00000464134 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
LAMA5-205ENST00000464134 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
LAMA5-205ENST00000464134 CUL7Q14999 1698 aa22.52■■□□□ 1.2
LAMA5-205ENST00000464134 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
LAMA5-205ENST00000464134 IGF1RP08069 1367 aa22.5■■□□□ 1.19
LAMA5-205ENST00000464134 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms