RNA–Protein interactions for RNA: ENST00000403525.5

CAD-202, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 1 (best) BASIC

Gene CAD, Length 6,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-202ENST00000403525 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
CAD-202ENST00000403525 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
CAD-202ENST00000403525 NISCHQ9Y2I1 1504 aa22.08■■□□□ 1.13
CAD-202ENST00000403525 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
CAD-202ENST00000403525 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
CAD-202ENST00000403525 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
CAD-202ENST00000403525 APLP2Q06481 763 aa21.46■■□□□ 1.03
CAD-202ENST00000403525 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
CAD-202ENST00000403525 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
CAD-202ENST00000403525 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
CAD-202ENST00000403525 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
CAD-202ENST00000403525 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
CAD-202ENST00000403525 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
CAD-202ENST00000403525 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
CAD-202ENST00000403525 MYT1LQ9UL68 1186 aa20.45■□□□□ 0.86
CAD-202ENST00000403525 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.85
CAD-202ENST00000403525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
CAD-202ENST00000403525 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
CAD-202ENST00000403525 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
CAD-202ENST00000403525 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
CAD-202ENST00000403525 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
CAD-202ENST00000403525 CENPBP07199 599 aaPredicted RBP20.04■□□□□ 0.8
CAD-202ENST00000403525 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
CAD-202ENST00000403525 ITGAEP38570 1179 aa19.97■□□□□ 0.79
CAD-202ENST00000403525 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
CAD-202ENST00000403525 NEFLP07196 543 aa19.93■□□□□ 0.78
CAD-202ENST00000403525 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
CAD-202ENST00000403525 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
CAD-202ENST00000403525 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.755e-7■□□□□ 11
CAD-202ENST00000403525 ABCC9O60706 1549 aa19.72■□□□□ 0.75
CAD-202ENST00000403525 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
CAD-202ENST00000403525 FBLN2P98095 1184 aa19.56■□□□□ 0.72
CAD-202ENST00000403525 DAXXQ9UER7 740 aaPredicted RBP19.52■□□□□ 0.72
CAD-202ENST00000403525 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
CAD-202ENST00000403525 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
CAD-202ENST00000403525 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
CAD-202ENST00000403525 LOC105371045A0A1W2PR82 267 aa19.39■□□□□ 0.7
CAD-202ENST00000403525 BCANQ96GW7 911 aa19.33■□□□□ 0.69
CAD-202ENST00000403525 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
CAD-202ENST00000403525 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.66
CAD-202ENST00000403525 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
CAD-202ENST00000403525 NEUROD1Q13562 356 aa19.18■□□□□ 0.66
CAD-202ENST00000403525 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
CAD-202ENST00000403525 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
CAD-202ENST00000403525 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
CAD-202ENST00000403525 HRCP23327 699 aa19.07■□□□□ 0.64
CAD-202ENST00000403525 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
CAD-202ENST00000403525 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
CAD-202ENST00000403525 MYT1Q01538 1121 aa19.03■□□□□ 0.64
CAD-202ENST00000403525 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
CAD-202ENST00000403525 ZBTB47Q9UFB7 747 aaPredicted RBP19■□□□□ 0.63
CAD-202ENST00000403525 BCL11AQ9H165 835 aa18.94■□□□□ 0.62
CAD-202ENST00000403525 NEFMP07197 916 aa18.93■□□□□ 0.62
CAD-202ENST00000403525 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
CAD-202ENST00000403525 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
CAD-202ENST00000403525 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
CAD-202ENST00000403525 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
CAD-202ENST00000403525 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
CAD-202ENST00000403525 ANP32CO43423 234 aa18.8■□□□□ 0.6
CAD-202ENST00000403525 DIEXFQ68CQ4 756 aaKnown RBP18.8■□□□□ 0.6
CAD-202ENST00000403525 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
CAD-202ENST00000403525 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
CAD-202ENST00000403525 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
CAD-202ENST00000403525 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
CAD-202ENST00000403525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.572e-7■□□□□ 10.9
CAD-202ENST00000403525 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
CAD-202ENST00000403525 A0A0G2JS52 829 aa18.53■□□□□ 0.56
CAD-202ENST00000403525 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
CAD-202ENST00000403525 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
CAD-202ENST00000403525 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
CAD-202ENST00000403525 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
CAD-202ENST00000403525 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
CAD-202ENST00000403525 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
CAD-202ENST00000403525 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
CAD-202ENST00000403525 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
CAD-202ENST00000403525 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
CAD-202ENST00000403525 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
CAD-202ENST00000403525 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
CAD-202ENST00000403525 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
CAD-202ENST00000403525 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
CAD-202ENST00000403525 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
CAD-202ENST00000403525 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
CAD-202ENST00000403525 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.52
CAD-202ENST00000403525 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
CAD-202ENST00000403525 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
CAD-202ENST00000403525 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
CAD-202ENST00000403525 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
CAD-202ENST00000403525 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
CAD-202ENST00000403525 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
CAD-202ENST00000403525 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
CAD-202ENST00000403525 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
CAD-202ENST00000403525 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
CAD-202ENST00000403525 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
CAD-202ENST00000403525 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
CAD-202ENST00000403525 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
CAD-202ENST00000403525 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
CAD-202ENST00000403525 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
CAD-202ENST00000403525 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
CAD-202ENST00000403525 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
CAD-202ENST00000403525 ARXQ96QS3 562 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms