RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.58
PXN-203ENST00000323871 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
PXN-203ENST00000323871 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.26
PXN-203ENST00000323871 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
PXN-203ENST00000323871 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
PXN-203ENST00000323871 APLP2Q06481 763 aa28.23■■■□□ 2.11
PXN-203ENST00000323871 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
PXN-203ENST00000323871 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
PXN-203ENST00000323871 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
PXN-203ENST00000323871 MYT1Q01538 1121 aa27.18■■□□□ 1.94
PXN-203ENST00000323871 ATP1B4Q9UN42 357 aaPredicted RBP27.16■■□□□ 1.94
PXN-203ENST00000323871 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
PXN-203ENST00000323871 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
PXN-203ENST00000323871 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
PXN-203ENST00000323871 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
PXN-203ENST00000323871 ZEB1P37275 1124 aaPredicted RBP26.81■■□□□ 1.88
PXN-203ENST00000323871 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
PXN-203ENST00000323871 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
PXN-203ENST00000323871 MYT1LQ9UL68 1186 aa26.44■■□□□ 1.82
PXN-203ENST00000323871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.39■■□□□ 1.81
PXN-203ENST00000323871 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.81
PXN-203ENST00000323871 ERICH6Q7L0X2 663 aa26.35■■□□□ 1.81
PXN-203ENST00000323871 NEFLP07196 543 aa26.21■■□□□ 1.79
PXN-203ENST00000323871 ABCC9O60706 1549 aa26■■□□□ 1.75
PXN-203ENST00000323871 ITGAEP38570 1179 aa25.93■■□□□ 1.74
PXN-203ENST00000323871 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
PXN-203ENST00000323871 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.73
PXN-203ENST00000323871 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
PXN-203ENST00000323871 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
PXN-203ENST00000323871 YTHDC1Q96MU7 727 aaKnown RBP25.73■■□□□ 1.71
PXN-203ENST00000323871 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
PXN-203ENST00000323871 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
PXN-203ENST00000323871 DAXXQ9UER7 740 aaPredicted RBP25.52■■□□□ 1.68
PXN-203ENST00000323871 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
PXN-203ENST00000323871 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
PXN-203ENST00000323871 FBLN2P98095 1184 aa25.42■■□□□ 1.66
PXN-203ENST00000323871 HRCP23327 699 aa25.42■■□□□ 1.66
PXN-203ENST00000323871 TRIM52Q96A61 297 aa25.4■■□□□ 1.66
PXN-203ENST00000323871 CNGB1Q14028 1251 aaPredicted RBP25.26■■□□□ 1.63
PXN-203ENST00000323871 CDK11AQ9UQ88 783 aaPredicted RBP25.05■■□□□ 1.6
PXN-203ENST00000323871 CLSPNQ9HAW4 1339 aa25.01■■□□□ 1.59
PXN-203ENST00000323871 NEUROD1Q13562 356 aa25■■□□□ 1.59
PXN-203ENST00000323871 BCANQ96GW7 911 aa25■■□□□ 1.59
PXN-203ENST00000323871 ZNF326Q5BKZ1 582 aaKnown RBP24.96■■□□□ 1.59
PXN-203ENST00000323871 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.59
PXN-203ENST00000323871 NPM1P06748 294 aaKnown RBP eCLIP24.9■■□□□ 1.58
PXN-203ENST00000323871 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
PXN-203ENST00000323871 NEFMP07197 916 aa24.89■■□□□ 1.57
PXN-203ENST00000323871 ZBTB47Q9UFB7 747 aaPredicted RBP24.88■■□□□ 1.57
PXN-203ENST00000323871 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
PXN-203ENST00000323871 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
PXN-203ENST00000323871 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
PXN-203ENST00000323871 DIEXFQ68CQ4 756 aaKnown RBP24.81■■□□□ 1.56
PXN-203ENST00000323871 ANP32CO43423 234 aa24.8■■□□□ 1.56
PXN-203ENST00000323871 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
PXN-203ENST00000323871 ARID3CA6NKF2 412 aa24.77■■□□□ 1.56
PXN-203ENST00000323871 SLC24A1O60721 1099 aa24.69■■□□□ 1.54
PXN-203ENST00000323871 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
PXN-203ENST00000323871 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
PXN-203ENST00000323871 RTL5Q5HYW3 569 aaPredicted RBP24.62■■□□□ 1.53
PXN-203ENST00000323871 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
PXN-203ENST00000323871 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
PXN-203ENST00000323871 GTF3C3Q9Y5Q9 886 aa24.56■■□□□ 1.52
PXN-203ENST00000323871 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
PXN-203ENST00000323871 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
PXN-203ENST00000323871 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
PXN-203ENST00000323871 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
PXN-203ENST00000323871 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
PXN-203ENST00000323871 TSPY4P0CV99 314 aa24.33■■□□□ 1.48
PXN-203ENST00000323871 TSPY10P0CW01 314 aa24.33■■□□□ 1.48
PXN-203ENST00000323871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.471e-6■■□□□ 11.9
PXN-203ENST00000323871 MTUS2Q5JR59 1369 aa24.21■■□□□ 1.47
PXN-203ENST00000323871 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
PXN-203ENST00000323871 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
PXN-203ENST00000323871 NACADO15069 1562 aa24.16■■□□□ 1.46
PXN-203ENST00000323871 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
PXN-203ENST00000323871 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.45
PXN-203ENST00000323871 PLEKHD1A6NEE1 506 aa24.07■■□□□ 1.44
PXN-203ENST00000323871 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
PXN-203ENST00000323871 EEA1Q15075 1411 aa24.02■■□□□ 1.44
PXN-203ENST00000323871 PPP1R15AO75807 674 aaPredicted RBP24.01■■□□□ 1.43
PXN-203ENST00000323871 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
PXN-203ENST00000323871 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
PXN-203ENST00000323871 SCAF1Q9H7N4 1312 aaKnown RBP23.96■■□□□ 1.43
PXN-203ENST00000323871 CLIP1P30622 1438 aa23.96■■□□□ 1.43
PXN-203ENST00000323871 ANP32AP39687 249 aaKnown RBP23.96■■□□□ 1.43
PXN-203ENST00000323871 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
PXN-203ENST00000323871 EIF5BO60841 1220 aaKnown RBP23.94■■□□□ 1.42
PXN-203ENST00000323871 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.94■■□□□ 1.42
PXN-203ENST00000323871 UPF2Q9HAU5 1272 aaKnown RBP23.9■■□□□ 1.42
PXN-203ENST00000323871 KDM2AQ9Y2K7 1162 aa23.9■■□□□ 1.42
PXN-203ENST00000323871 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
PXN-203ENST00000323871 NPM2Q86SE8 214 aaKnown RBP23.89■■□□□ 1.41
PXN-203ENST00000323871 TMC1Q8TDI8 760 aa23.89■■□□□ 1.41
PXN-203ENST00000323871 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
PXN-203ENST00000323871 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
PXN-203ENST00000323871 C14orf37Q86TY3 774 aa23.87■■□□□ 1.41
PXN-203ENST00000323871 KIF27Q86VH2 1401 aa23.86■■□□□ 1.41
PXN-203ENST00000323871 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
PXN-203ENST00000323871 HSP90AA1P07900 732 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms