RNA–Protein interactions for RNA: ENST00000393637.5

FGFR4-202, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FGFR4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-202ENST00000393637 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
FGFR4-202ENST00000393637 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
FGFR4-202ENST00000393637 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
FGFR4-202ENST00000393637 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
FGFR4-202ENST00000393637 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
FGFR4-202ENST00000393637 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
FGFR4-202ENST00000393637 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
FGFR4-202ENST00000393637 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
FGFR4-202ENST00000393637 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
FGFR4-202ENST00000393637 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
FGFR4-202ENST00000393637 ABCC9O60706 1549 aa29.98■■■□□ 2.39
FGFR4-202ENST00000393637 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
FGFR4-202ENST00000393637 NACADO15069 1562 aa29.57■■■□□ 2.32
FGFR4-202ENST00000393637 LOC105371045A0A1W2PR82 267 aa29.35■■■□□ 2.29
FGFR4-202ENST00000393637 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
FGFR4-202ENST00000393637 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
FGFR4-202ENST00000393637 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
FGFR4-202ENST00000393637 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
FGFR4-202ENST00000393637 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
FGFR4-202ENST00000393637 WIZO95785 1651 aa29.03■■■□□ 2.24
FGFR4-202ENST00000393637 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
FGFR4-202ENST00000393637 UNC13AQ9UPW8 1703 aa28.81■■■□□ 2.2
FGFR4-202ENST00000393637 EHMT2Q96KQ7 1210 aa28.8■■■□□ 2.2
FGFR4-202ENST00000393637 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
FGFR4-202ENST00000393637 HRCP23327 699 aa28.72■■■□□ 2.19
FGFR4-202ENST00000393637 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.196e-7■□□□□ 10.4
FGFR4-202ENST00000393637 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
FGFR4-202ENST00000393637 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
FGFR4-202ENST00000393637 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
FGFR4-202ENST00000393637 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
FGFR4-202ENST00000393637 TRIM26Q12899 539 aaPredicted RBP28.42■■■□□ 2.14
FGFR4-202ENST00000393637 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
FGFR4-202ENST00000393637 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
FGFR4-202ENST00000393637 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
FGFR4-202ENST00000393637 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
FGFR4-202ENST00000393637 SOGA1O94964 1423 aa28■■■□□ 2.07
FGFR4-202ENST00000393637 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
FGFR4-202ENST00000393637 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
FGFR4-202ENST00000393637 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
FGFR4-202ENST00000393637 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
FGFR4-202ENST00000393637 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
FGFR4-202ENST00000393637 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
FGFR4-202ENST00000393637 TTBK1Q5TCY1 1321 aaPredicted RBP27.77■■■□□ 2.04
FGFR4-202ENST00000393637 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
FGFR4-202ENST00000393637 CEP162Q5TB80 1403 aa27.7■■■□□ 2.03
FGFR4-202ENST00000393637 SYNJ1O43426 1573 aa27.7■■■□□ 2.02
FGFR4-202ENST00000393637 EEA1Q15075 1411 aa27.63■■■□□ 2.01
FGFR4-202ENST00000393637 TNIKQ9UKE5 1360 aa27.62■■■□□ 2.01
FGFR4-202ENST00000393637 ZEB1P37275 1124 aaPredicted RBP27.57■■■□□ 2
FGFR4-202ENST00000393637 GOLGA3Q08378 1498 aa27.52■■■□□ 2
FGFR4-202ENST00000393637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
FGFR4-202ENST00000393637 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
FGFR4-202ENST00000393637 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
FGFR4-202ENST00000393637 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
FGFR4-202ENST00000393637 HMGXB3Q12766 1538 aa27.33■■□□□ 1.97
FGFR4-202ENST00000393637 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.97
FGFR4-202ENST00000393637 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
FGFR4-202ENST00000393637 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
FGFR4-202ENST00000393637 KIF21BO75037 1637 aa27.31■■□□□ 1.96
FGFR4-202ENST00000393637 CLIP1P30622 1438 aa27.24■■□□□ 1.95
FGFR4-202ENST00000393637 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
FGFR4-202ENST00000393637 CUX1P39880 1505 aa27.17■■□□□ 1.94
FGFR4-202ENST00000393637 CFTRP13569 1480 aa27.13■■□□□ 1.93
FGFR4-202ENST00000393637 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
FGFR4-202ENST00000393637 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
FGFR4-202ENST00000393637 APLP2Q06481 763 aa27■■□□□ 1.91
FGFR4-202ENST00000393637 PRXQ9BXM0 1461 aa26.99■■□□□ 1.91
FGFR4-202ENST00000393637 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
FGFR4-202ENST00000393637 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
FGFR4-202ENST00000393637 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
FGFR4-202ENST00000393637 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
FGFR4-202ENST00000393637 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
FGFR4-202ENST00000393637 ARAP1Q96P48 1450 aa26.82■■□□□ 1.88
FGFR4-202ENST00000393637 CUX2O14529 1486 aa26.81■■□□□ 1.88
FGFR4-202ENST00000393637 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
FGFR4-202ENST00000393637 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
FGFR4-202ENST00000393637 IGF1RP08069 1367 aa26.72■■□□□ 1.87
FGFR4-202ENST00000393637 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
FGFR4-202ENST00000393637 NESP48681 1621 aa26.65■■□□□ 1.86
FGFR4-202ENST00000393637 ARHGAP35Q9NRY4 1499 aa26.64■■□□□ 1.86
FGFR4-202ENST00000393637 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
FGFR4-202ENST00000393637 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
FGFR4-202ENST00000393637 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
FGFR4-202ENST00000393637 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.84
FGFR4-202ENST00000393637 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
FGFR4-202ENST00000393637 TOPBP1Q92547 1522 aa26.45■■□□□ 1.82
FGFR4-202ENST00000393637 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
FGFR4-202ENST00000393637 ITGAEP38570 1179 aa26.45■■□□□ 1.82
FGFR4-202ENST00000393637 POLA1P09884 1462 aaPredicted RBP26.44■■□□□ 1.82
FGFR4-202ENST00000393637 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
FGFR4-202ENST00000393637 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.81
FGFR4-202ENST00000393637 SCAF1Q9H7N4 1312 aaKnown RBP26.35■■□□□ 1.81
FGFR4-202ENST00000393637 RRBP1Q9P2E9 1410 aaKnown RBP26.35■■□□□ 1.81
FGFR4-202ENST00000393637 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
FGFR4-202ENST00000393637 CCNB3Q8WWL7 1395 aa26.32■■□□□ 1.8
FGFR4-202ENST00000393637 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
FGFR4-202ENST00000393637 DHX57Q6P158 1386 aaKnown RBP26.3■■□□□ 1.8
FGFR4-202ENST00000393637 TIAM1Q13009 1591 aa26.27■■□□□ 1.8
FGFR4-202ENST00000393637 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
FGFR4-202ENST00000393637 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms