RNA–Protein interactions for RNA: ENST00000311052.9

CARHSP1-201, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-201ENST00000311052 NISCHQ9Y2I1 1504 aa44.03■■■■■ 4.64
CARHSP1-201ENST00000311052 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
CARHSP1-201ENST00000311052 ABCC9O60706 1549 aa38.55■■■■□ 3.76
CARHSP1-201ENST00000311052 RB1CC1Q8TDY2 1594 aa37■■■■□ 3.51
CARHSP1-201ENST00000311052 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
CARHSP1-201ENST00000311052 NACADO15069 1562 aa36.92■■■■□ 3.5
CARHSP1-201ENST00000311052 MYO15BQ96JP2 1530 aa36.67■■■■□ 3.46
CARHSP1-201ENST00000311052 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
CARHSP1-201ENST00000311052 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
CARHSP1-201ENST00000311052 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
CARHSP1-201ENST00000311052 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
CARHSP1-201ENST00000311052 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
CARHSP1-201ENST00000311052 SCRIBQ14160 1630 aa35.72■■■■□ 3.31
CARHSP1-201ENST00000311052 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
CARHSP1-201ENST00000311052 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
CARHSP1-201ENST00000311052 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
CARHSP1-201ENST00000311052 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
CARHSP1-201ENST00000311052 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
CARHSP1-201ENST00000311052 SMARCA4P51532 1647 aa34.16■■■■□ 3.06
CARHSP1-201ENST00000311052 BAZ1AQ9NRL2 1556 aaPredicted RBP34.14■■■■□ 3.06
CARHSP1-201ENST00000311052 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
CARHSP1-201ENST00000311052 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
CARHSP1-201ENST00000311052 SMARCA2P51531 1590 aa34.01■■■■□ 3.03
CARHSP1-201ENST00000311052 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
CARHSP1-201ENST00000311052 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
CARHSP1-201ENST00000311052 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
CARHSP1-201ENST00000311052 BAZ1BQ9UIG0 1483 aaKnown RBP33.78■■■■□ 3
CARHSP1-201ENST00000311052 WIZO95785 1651 aa33.5■■■□□ 2.95
CARHSP1-201ENST00000311052 RSF1Q96T23 1441 aaPredicted RBP33.5■■■□□ 2.95
CARHSP1-201ENST00000311052 NESP48681 1621 aa33.29■■■□□ 2.92
CARHSP1-201ENST00000311052 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
CARHSP1-201ENST00000311052 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
CARHSP1-201ENST00000311052 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
CARHSP1-201ENST00000311052 CADPSQ9ULU8 1353 aa33.12■■■□□ 2.89
CARHSP1-201ENST00000311052 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
CARHSP1-201ENST00000311052 CUX2O14529 1486 aa32.99■■■□□ 2.87
CARHSP1-201ENST00000311052 CFTRP13569 1480 aa32.86■■■□□ 2.85
CARHSP1-201ENST00000311052 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
CARHSP1-201ENST00000311052 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
CARHSP1-201ENST00000311052 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
CARHSP1-201ENST00000311052 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.83
CARHSP1-201ENST00000311052 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
CARHSP1-201ENST00000311052 CEP164Q9UPV0 1460 aa32.67■■■□□ 2.82
CARHSP1-201ENST00000311052 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
CARHSP1-201ENST00000311052 WDR62O43379 1518 aa32.54■■■□□ 2.8
CARHSP1-201ENST00000311052 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
CARHSP1-201ENST00000311052 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
CARHSP1-201ENST00000311052 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
CARHSP1-201ENST00000311052 ABCC8Q09428 1581 aa32.17■■■□□ 2.74
CARHSP1-201ENST00000311052 TOPBP1Q92547 1522 aa32.15■■■□□ 2.74
CARHSP1-201ENST00000311052 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
CARHSP1-201ENST00000311052 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
CARHSP1-201ENST00000311052 POLA1P09884 1462 aaPredicted RBP31.86■■■□□ 2.69
CARHSP1-201ENST00000311052 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
CARHSP1-201ENST00000311052 CUX1P39880 1505 aa31.82■■■□□ 2.68
CARHSP1-201ENST00000311052 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
CARHSP1-201ENST00000311052 SOGA1O94964 1423 aa31.77■■■□□ 2.68
CARHSP1-201ENST00000311052 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
CARHSP1-201ENST00000311052 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
CARHSP1-201ENST00000311052 AQRO60306 1485 aaKnown RBP eCLIP31.69■■■□□ 2.667e-8■■■■■ 41.3
CARHSP1-201ENST00000311052 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
CARHSP1-201ENST00000311052 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
CARHSP1-201ENST00000311052 TDRD9Q8NDG6 1382 aaKnown RBP31.61■■■□□ 2.65
CARHSP1-201ENST00000311052 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
CARHSP1-201ENST00000311052 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
CARHSP1-201ENST00000311052 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
CARHSP1-201ENST00000311052 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
CARHSP1-201ENST00000311052 ABCA10Q8WWZ4 1543 aa31.46■■■□□ 2.63
CARHSP1-201ENST00000311052 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
CARHSP1-201ENST00000311052 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
CARHSP1-201ENST00000311052 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
CARHSP1-201ENST00000311052 FBLN2P98095 1184 aa31.37■■■□□ 2.61
CARHSP1-201ENST00000311052 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
CARHSP1-201ENST00000311052 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
CARHSP1-201ENST00000311052 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
CARHSP1-201ENST00000311052 CHD1O14646 1710 aa31.27■■■□□ 2.6
CARHSP1-201ENST00000311052 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
CARHSP1-201ENST00000311052 PBRM1Q86U86 1689 aa31.22■■■□□ 2.59
CARHSP1-201ENST00000311052 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
CARHSP1-201ENST00000311052 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
CARHSP1-201ENST00000311052 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
CARHSP1-201ENST00000311052 ARHGEF11O15085 1522 aa31.04■■■□□ 2.56
CARHSP1-201ENST00000311052 RIMBP3CA6NJZ7 1639 aa31.04■■■□□ 2.56
CARHSP1-201ENST00000311052 RIMBP3BA6NNM3 1639 aa31.04■■■□□ 2.56
CARHSP1-201ENST00000311052 RIMBP3Q9UFD9 1639 aa31.04■■■□□ 2.56
CARHSP1-201ENST00000311052 FHAD1B1AJZ9 1412 aa31.03■■■□□ 2.56
CARHSP1-201ENST00000311052 ADAMTS12P58397 1594 aa31.01■■■□□ 2.56
CARHSP1-201ENST00000311052 CLASP1Q7Z460 1538 aa31■■■□□ 2.55
CARHSP1-201ENST00000311052 GRIN2AQ12879 1464 aa30.99■■■□□ 2.55
CARHSP1-201ENST00000311052 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
CARHSP1-201ENST00000311052 IGF1RP08069 1367 aa30.88■■■□□ 2.53
CARHSP1-201ENST00000311052 NUP160Q12769 1436 aa30.87■■■□□ 2.53
CARHSP1-201ENST00000311052 CYB5RLQ6IPT4 315 aa30.84■■■□□ 2.53
CARHSP1-201ENST00000311052 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
CARHSP1-201ENST00000311052 ARAP1Q96P48 1450 aa30.79■■■□□ 2.52
CARHSP1-201ENST00000311052 CUL7Q14999 1698 aa30.71■■■□□ 2.51
CARHSP1-201ENST00000311052 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
CARHSP1-201ENST00000311052 SHROOM2Q13796 1616 aa30.6■■■□□ 2.49
CARHSP1-201ENST00000311052 JPH4Q96JJ6 628 aa30.6■■■□□ 2.49
CARHSP1-201ENST00000311052 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms