RNA–Protein interactions for RNA: ENST00000548933.5

PCBP2-213, Transcript of poly(rC) binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene PCBP2, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-213ENST00000548933 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
PCBP2-213ENST00000548933 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
PCBP2-213ENST00000548933 ABCC9O60706 1549 aa19.28■□□□□ 0.68
PCBP2-213ENST00000548933 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
PCBP2-213ENST00000548933 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
PCBP2-213ENST00000548933 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
PCBP2-213ENST00000548933 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
PCBP2-213ENST00000548933 NACADO15069 1562 aa18.15■□□□□ 0.5
PCBP2-213ENST00000548933 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
PCBP2-213ENST00000548933 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
PCBP2-213ENST00000548933 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
PCBP2-213ENST00000548933 MYO15BQ96JP2 1530 aa17.84■□□□□ 0.45
PCBP2-213ENST00000548933 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
PCBP2-213ENST00000548933 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
PCBP2-213ENST00000548933 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
PCBP2-213ENST00000548933 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
PCBP2-213ENST00000548933 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
PCBP2-213ENST00000548933 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
PCBP2-213ENST00000548933 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
PCBP2-213ENST00000548933 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
PCBP2-213ENST00000548933 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
PCBP2-213ENST00000548933 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
PCBP2-213ENST00000548933 CUX2O14529 1486 aa16.81■□□□□ 0.28
PCBP2-213ENST00000548933 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
PCBP2-213ENST00000548933 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
PCBP2-213ENST00000548933 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
PCBP2-213ENST00000548933 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
PCBP2-213ENST00000548933 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
PCBP2-213ENST00000548933 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
PCBP2-213ENST00000548933 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
PCBP2-213ENST00000548933 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
PCBP2-213ENST00000548933 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
PCBP2-213ENST00000548933 WIZO95785 1651 aa16.53■□□□□ 0.24
PCBP2-213ENST00000548933 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
PCBP2-213ENST00000548933 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
PCBP2-213ENST00000548933 NESP48681 1621 aa16.49■□□□□ 0.23
PCBP2-213ENST00000548933 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
PCBP2-213ENST00000548933 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
PCBP2-213ENST00000548933 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
PCBP2-213ENST00000548933 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
PCBP2-213ENST00000548933 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
PCBP2-213ENST00000548933 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
PCBP2-213ENST00000548933 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
PCBP2-213ENST00000548933 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
PCBP2-213ENST00000548933 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
PCBP2-213ENST00000548933 WDR62O43379 1518 aa16.17■□□□□ 0.18
PCBP2-213ENST00000548933 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
PCBP2-213ENST00000548933 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
PCBP2-213ENST00000548933 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
PCBP2-213ENST00000548933 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
PCBP2-213ENST00000548933 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
PCBP2-213ENST00000548933 CFTRP13569 1480 aa15.96■□□□□ 0.14
PCBP2-213ENST00000548933 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
PCBP2-213ENST00000548933 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
PCBP2-213ENST00000548933 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
PCBP2-213ENST00000548933 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
PCBP2-213ENST00000548933 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
PCBP2-213ENST00000548933 IFT140Q96RY7 1462 aa15.74■□□□□ 0.11
PCBP2-213ENST00000548933 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
PCBP2-213ENST00000548933 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
PCBP2-213ENST00000548933 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
PCBP2-213ENST00000548933 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
PCBP2-213ENST00000548933 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
PCBP2-213ENST00000548933 CHD1O14646 1710 aa15.63■□□□□ 0.09
PCBP2-213ENST00000548933 FOXD1Q16676 465 aa15.63■□□□□ 0.09
PCBP2-213ENST00000548933 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
PCBP2-213ENST00000548933 CUX1P39880 1505 aa15.58■□□□□ 0.09
PCBP2-213ENST00000548933 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
PCBP2-213ENST00000548933 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
PCBP2-213ENST00000548933 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
PCBP2-213ENST00000548933 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
PCBP2-213ENST00000548933 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
PCBP2-213ENST00000548933 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
PCBP2-213ENST00000548933 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
PCBP2-213ENST00000548933 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
PCBP2-213ENST00000548933 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.073e-7■■■■■ 27.2
PCBP2-213ENST00000548933 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
PCBP2-213ENST00000548933 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
PCBP2-213ENST00000548933 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
PCBP2-213ENST00000548933 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
PCBP2-213ENST00000548933 CLASP1Q7Z460 1538 aa15.42■□□□□ 0.06
PCBP2-213ENST00000548933 FBLN2P98095 1184 aa15.41■□□□□ 0.06
PCBP2-213ENST00000548933 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
PCBP2-213ENST00000548933 SOGA1O94964 1423 aa15.38■□□□□ 0.05
PCBP2-213ENST00000548933 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
PCBP2-213ENST00000548933 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
PCBP2-213ENST00000548933 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
PCBP2-213ENST00000548933 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.04
PCBP2-213ENST00000548933 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
PCBP2-213ENST00000548933 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
PCBP2-213ENST00000548933 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
PCBP2-213ENST00000548933 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
PCBP2-213ENST00000548933 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
PCBP2-213ENST00000548933 GAPVD1Q14C86 1478 aa15.23■□□□□ 0.03
PCBP2-213ENST00000548933 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
PCBP2-213ENST00000548933 RUSC2Q8N2Y8 1516 aa15.19■□□□□ 0.02
PCBP2-213ENST00000548933 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
PCBP2-213ENST00000548933 CUL7Q14999 1698 aa15.14■□□□□ 0.01
PCBP2-213ENST00000548933 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
PCBP2-213ENST00000548933 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms