RNA–Protein interactions for RNA: ENST00000637386.1

PXN-220, Transcript of paxillin, humanhuman

TSL 5

Gene PXN, Length 621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-220ENST00000637386 NISCHQ9Y2I1 1504 aa50.39■■■■■ 5.66
PXN-220ENST00000637386 CCDC180Q9P1Z9 1646 aa44.61■■■■■ 4.73
PXN-220ENST00000637386 ABCC9O60706 1549 aa43.01■■■■■ 4.48
PXN-220ENST00000637386 ZCCHC6Q5VYS8 1495 aaKnown RBP42.11■■■■■ 4.33
PXN-220ENST00000637386 DCAF8L2P0C7V8 631 aa41.88■■■■■ 4.29
PXN-220ENST00000637386 NACADO15069 1562 aa41.71■■■■■ 4.27
PXN-220ENST00000637386 DCAF1Q9Y4B6 1507 aa41.68■■■■■ 4.26
PXN-220ENST00000637386 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
PXN-220ENST00000637386 MYO15BQ96JP2 1530 aa41.6■■■■■ 4.25
PXN-220ENST00000637386 UNC13AQ9UPW8 1703 aa40.84■■■■■ 4.13
PXN-220ENST00000637386 SCRIBQ14160 1630 aa40.79■■■■■ 4.12
PXN-220ENST00000637386 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
PXN-220ENST00000637386 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.04
PXN-220ENST00000637386 PABPN1Q86U42 306 aaKnown RBP eCLIP40.26■■■■■ 4.04
PXN-220ENST00000637386 EIF4G1Q04637 1599 aaKnown RBP39.24■■■■□ 3.87
PXN-220ENST00000637386 CECR2Q9BXF3 1484 aa39.19■■■■□ 3.86
PXN-220ENST00000637386 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
PXN-220ENST00000637386 SMARCA4P51532 1647 aa39.03■■■■□ 3.84
PXN-220ENST00000637386 CC2D2AQ9P2K1 1620 aa38.95■■■■□ 3.83
PXN-220ENST00000637386 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
PXN-220ENST00000637386 DNAJC5BQ9UF47 199 aa38.81■■■■□ 3.8
PXN-220ENST00000637386 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
PXN-220ENST00000637386 SMARCA2P51531 1590 aa38.6■■■■□ 3.77
PXN-220ENST00000637386 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.77
PXN-220ENST00000637386 ATAD2BQ9ULI0 1458 aa38.57■■■■□ 3.76
PXN-220ENST00000637386 WIZO95785 1651 aa38.56■■■■□ 3.76
PXN-220ENST00000637386 NCAPD3P42695 1498 aa38.42■■■■□ 3.74
PXN-220ENST00000637386 HMGXB3Q12766 1538 aa38.36■■■■□ 3.73
PXN-220ENST00000637386 BAZ1BQ9UIG0 1483 aaKnown RBP38.35■■■■□ 3.73
PXN-220ENST00000637386 SUPT5HO00267 1087 aaKnown RBP38.17■■■■□ 3.7
PXN-220ENST00000637386 TOP2AP11388 1531 aaKnown RBP38.13■■■■□ 3.69
PXN-220ENST00000637386 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
PXN-220ENST00000637386 NESP48681 1621 aa37.4■■■■□ 3.58
PXN-220ENST00000637386 LAMC3Q9Y6N6 1575 aa37.39■■■■□ 3.58
PXN-220ENST00000637386 CADPSQ9ULU8 1353 aa37.34■■■■□ 3.57
PXN-220ENST00000637386 CFTRP13569 1480 aa37.26■■■■□ 3.56
PXN-220ENST00000637386 PRDM2Q13029 1718 aa37.25■■■■□ 3.55
PXN-220ENST00000637386 KIF21AQ7Z4S6 1674 aa37.09■■■■□ 3.53
PXN-220ENST00000637386 PDS5BQ9NTI5 1447 aa37.07■■■■□ 3.52
PXN-220ENST00000637386 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
PXN-220ENST00000637386 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
PXN-220ENST00000637386 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.5
PXN-220ENST00000637386 THOC2Q8NI27 1593 aaKnown RBP36.73■■■■□ 3.47
PXN-220ENST00000637386 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
PXN-220ENST00000637386 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
PXN-220ENST00000637386 WDR62O43379 1518 aa36.54■■■■□ 3.44
PXN-220ENST00000637386 ABCC8Q09428 1581 aa36.54■■■■□ 3.44
PXN-220ENST00000637386 DNMBPQ6XZF7 1577 aa36.5■■■■□ 3.43
PXN-220ENST00000637386 TOPBP1Q92547 1522 aa36.47■■■■□ 3.43
PXN-220ENST00000637386 CUX1P39880 1505 aa36.43■■■■□ 3.42
PXN-220ENST00000637386 WRNQ14191 1432 aaPredicted RBP eCLIP36.42■■■■□ 3.42
PXN-220ENST00000637386 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
PXN-220ENST00000637386 CUX2O14529 1486 aa36.35■■■■□ 3.41
PXN-220ENST00000637386 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
PXN-220ENST00000637386 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
PXN-220ENST00000637386 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
PXN-220ENST00000637386 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
PXN-220ENST00000637386 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
PXN-220ENST00000637386 TARBP1Q13395 1621 aaKnown RBP36.05■■■■□ 3.36
PXN-220ENST00000637386 SOGA1O94964 1423 aa36.04■■■■□ 3.36
PXN-220ENST00000637386 RAD54L2Q9Y4B4 1467 aa36.04■■■■□ 3.36
PXN-220ENST00000637386 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
PXN-220ENST00000637386 WDR97A6NE52 1622 aa35.96■■■■□ 3.35
PXN-220ENST00000637386 CHIC1Q5VXU3 224 aa35.94■■■■□ 3.34
PXN-220ENST00000637386 ABCA10Q8WWZ4 1543 aa35.86■■■■□ 3.33
PXN-220ENST00000637386 ZNF608Q9ULD9 1512 aaPredicted RBP35.86■■■■□ 3.33
PXN-220ENST00000637386 EIF4G3O43432 1585 aaKnown RBP35.81■■■■□ 3.32
PXN-220ENST00000637386 TDRD9Q8NDG6 1382 aaKnown RBP35.76■■■■□ 3.32
PXN-220ENST00000637386 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.314e-6■■■■□ 20.2
PXN-220ENST00000637386 ABCA5Q8WWZ7 1642 aa35.72■■■■□ 3.31
PXN-220ENST00000637386 PBRM1Q86U86 1689 aa35.67■■■■□ 3.3
PXN-220ENST00000637386 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
PXN-220ENST00000637386 KIF27Q86VH2 1401 aa35.59■■■■□ 3.29
PXN-220ENST00000637386 GRIN2BQ13224 1484 aa35.54■■■■□ 3.28
PXN-220ENST00000637386 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
PXN-220ENST00000637386 ERICH3Q5RHP9 1530 aa35.46■■■■□ 3.27
PXN-220ENST00000637386 DNAJC5Q9H3Z4 198 aa35.45■■■■□ 3.27
PXN-220ENST00000637386 SNAPC4Q5SXM2 1469 aa35.44■■■■□ 3.26
PXN-220ENST00000637386 MAGI1Q96QZ7 1491 aaPredicted RBP35.39■■■■□ 3.26
PXN-220ENST00000637386 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
PXN-220ENST00000637386 CUL7Q14999 1698 aa35.33■■■■□ 3.25
PXN-220ENST00000637386 IGF1RP08069 1367 aa35.32■■■■□ 3.24
PXN-220ENST00000637386 CHD1O14646 1710 aa35.32■■■■□ 3.24
PXN-220ENST00000637386 EEA1Q15075 1411 aa35.32■■■■□ 3.24
PXN-220ENST00000637386 FAM9AQ8IZU1 332 aaPredicted RBP35.29■■■■□ 3.24
PXN-220ENST00000637386 SYNJ2O15056 1496 aa35.24■■■■□ 3.23
PXN-220ENST00000637386 FHAD1B1AJZ9 1412 aa35.23■■■■□ 3.23
PXN-220ENST00000637386 FBLN2P98095 1184 aa35.2■■■■□ 3.23
PXN-220ENST00000637386 CHMP7Q8WUX9 453 aaPredicted RBP35.17■■■■□ 3.22
PXN-220ENST00000637386 CSRNP3Q8WYN3 585 aa35.17■■■■□ 3.22
PXN-220ENST00000637386 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
PXN-220ENST00000637386 GRIN2AQ12879 1464 aa35.1■■■■□ 3.21
PXN-220ENST00000637386 PRXQ9BXM0 1461 aa35.04■■■■□ 3.2
PXN-220ENST00000637386 RAPGEF2Q9Y4G8 1499 aa35.04■■■■□ 3.2
PXN-220ENST00000637386 KIF21BO75037 1637 aa34.99■■■■□ 3.19
PXN-220ENST00000637386 CEP170Q5SW79 1584 aa34.95■■■■□ 3.18
PXN-220ENST00000637386 OSCARQ8IYS5 282 aa34.93■■■■□ 3.18
PXN-220ENST00000637386 NUP160Q12769 1436 aa34.88■■■■□ 3.17
PXN-220ENST00000637386 CTTNBP2Q8WZ74 1663 aa34.83■■■■□ 3.17
PXN-220ENST00000637386 EHMT2Q96KQ7 1210 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms