RNA–Protein interactions for RNA: ENST00000470718.5

PSME1-203, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-203ENST00000470718 CHIC1Q5VXU3 224 aa9.17□□□□□ -0.94
PSME1-203ENST00000470718 AEBP2Q6ZN18 517 aaPredicted RBP8.84□□□□□ -0.99
PSME1-203ENST00000470718 PHF23Q9BUL5 403 aaPredicted RBP8.12□□□□□ -1.11
PSME1-203ENST00000470718 PLPPR3Q6T4P5 718 aa7.69□□□□□ -1.18
PSME1-203ENST00000470718 EHMT2Q96KQ7 1210 aa7.46□□□□□ -1.22
PSME1-203ENST00000470718 NISCHQ9Y2I1 1504 aa7.44□□□□□ -1.22
PSME1-203ENST00000470718 SENP3Q9H4L4 574 aaPredicted RBP7.41□□□□□ -1.22
PSME1-203ENST00000470718 KCNA4P22459 653 aa7.29□□□□□ -1.24
PSME1-203ENST00000470718 ADRA2BP18089 450 aa7.16□□□□□ -1.26
PSME1-203ENST00000470718 CSRNP3Q8WYN3 585 aa7.14□□□□□ -1.27
PSME1-203ENST00000470718 SLC4A1APQ9BWU0 796 aaKnown RBP7.04□□□□□ -1.28
PSME1-203ENST00000470718 SLC24A1O60721 1099 aa7.03□□□□□ -1.28
PSME1-203ENST00000470718 PPP6R1Q9UPN7 881 aa6.99□□□□□ -1.29
PSME1-203ENST00000470718 PPP4R3CPQ6ZMV5 832 aa6.84□□□□□ -1.31
PSME1-203ENST00000470718 NCBP3Q53F19 620 aaKnown RBP6.82□□□□□ -1.32
PSME1-203ENST00000470718 FOXD1Q16676 465 aa6.81□□□□□ -1.32
PSME1-203ENST00000470718 AMER1Q5JTC6 1135 aaPredicted RBP6.81□□□□□ -1.32
PSME1-203ENST00000470718 RTN4Q9NQC3 1192 aaKnown RBP6.8□□□□□ -1.32
PSME1-203ENST00000470718 NPM3O75607 178 aaKnown RBP6.72□□□□□ -1.33
PSME1-203ENST00000470718 ZBTB22O15209 634 aa6.71□□□□□ -1.34
PSME1-203ENST00000470718 PIAS4Q8N2W9 510 aaPredicted RBP6.56□□□□□ -1.36
PSME1-203ENST00000470718 FOXD4L1Q9NU39 408 aa6.56□□□□□ -1.36
PSME1-203ENST00000470718 CNKSR2Q8WXI2 1034 aa6.53□□□□□ -1.36
PSME1-203ENST00000470718 CCDC180Q9P1Z9 1646 aa6.51□□□□□ -1.37
PSME1-203ENST00000470718 DNAJC5BQ9UF47 199 aa6.45□□□□□ -1.38
PSME1-203ENST00000470718 FKBP8Q14318 412 aa6.42□□□□□ -1.38
PSME1-203ENST00000470718 SCAF1Q9H7N4 1312 aaKnown RBP6.42□□□□□ -1.38
PSME1-203ENST00000470718 ATXN8OSP0DMR3 200 aa6.28□□□□□ -1.4
PSME1-203ENST00000470718 RNF216Q9NWF9 866 aaPredicted RBP6.27□□□□□ -1.41
PSME1-203ENST00000470718 PLCB2Q00722 1185 aa6.25□□□□□ -1.41
PSME1-203ENST00000470718 ZCCHC6Q5VYS8 1495 aaKnown RBP6.25□□□□□ -1.41
PSME1-203ENST00000470718 ABCC9O60706 1549 aa6.24□□□□□ -1.41
PSME1-203ENST00000470718 SLC4A2P04920 1241 aa6.21□□□□□ -1.42
PSME1-203ENST00000470718 MYCNP04198 464 aaPredicted RBP6.2□□□□□ -1.42
PSME1-203ENST00000470718 MAPK8IP2Q13387 824 aaPredicted RBP6.2□□□□□ -1.42
PSME1-203ENST00000470718 BCANQ96GW7 911 aa6.2□□□□□ -1.42
PSME1-203ENST00000470718 DCAF8L2P0C7V8 631 aa6.19□□□□□ -1.42
PSME1-203ENST00000470718 PRKCSHP14314 528 aaPredicted RBP6.17□□□□□ -1.42
PSME1-203ENST00000470718 HAP1P54257 671 aaPredicted RBP6.16□□□□□ -1.42
PSME1-203ENST00000470718 DCAF1Q9Y4B6 1507 aa6.15□□□□□ -1.42
PSME1-203ENST00000470718 TAOK2Q9UL54 1235 aa6.15□□□□□ -1.42
PSME1-203ENST00000470718 MYO15BQ96JP2 1530 aa6.11□□□□□ -1.43
PSME1-203ENST00000470718 HOXD11P31277 338 aaPredicted RBP6.1□□□□□ -1.43
PSME1-203ENST00000470718 NACADO15069 1562 aa6.1□□□□□ -1.43
PSME1-203ENST00000470718 VSIG10Q8N0Z9 540 aa6.09□□□□□ -1.43
PSME1-203ENST00000470718 MSH5O43196 834 aa6.08□□□□□ -1.44
PSME1-203ENST00000470718 RB1CC1Q8TDY2 1594 aa6.06□□□□□ -1.44
PSME1-203ENST00000470718 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
PSME1-203ENST00000470718 TPRNQ4KMQ1 711 aa6.04□□□□□ -1.44
PSME1-203ENST00000470718 FBXO3Q9UK99 471 aa6.04□□□□□ -1.44
PSME1-203ENST00000470718 DMRT2Q9Y5R5 561 aa6□□□□□ -1.45
PSME1-203ENST00000470718 SCRIBQ14160 1630 aa5.99□□□□□ -1.45
PSME1-203ENST00000470718 ATF5Q9Y2D1 282 aaPredicted RBP5.99□□□□□ -1.45
PSME1-203ENST00000470718 KDM2AQ9Y2K7 1162 aa5.94□□□□□ -1.46
PSME1-203ENST00000470718 VASPP50552 380 aaPredicted RBP5.93□□□□□ -1.46
PSME1-203ENST00000470718 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.92□□□□□ -1.46
PSME1-203ENST00000470718 PKD2Q13563 968 aa5.91□□□□□ -1.46
PSME1-203ENST00000470718 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
PSME1-203ENST00000470718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.9□□□□□ -1.46
PSME1-203ENST00000470718 FBLN2P98095 1184 aa5.9□□□□□ -1.46
PSME1-203ENST00000470718 HNRNPUL2Q1KMD3 747 aaKnown RBP5.9□□□□□ -1.46
PSME1-203ENST00000470718 IFNLR1Q8IU57 520 aaPredicted RBP5.9□□□□□ -1.46
PSME1-203ENST00000470718 BBXQ8WY36 941 aaPredicted RBP5.9□□□□□ -1.46
PSME1-203ENST00000470718 TIMELESSQ9UNS1 1208 aa5.9□□□□□ -1.46
PSME1-203ENST00000470718 SPDYE4A6NLX3 237 aa5.89□□□□□ -1.47
PSME1-203ENST00000470718 SAMD1Q6SPF0 538 aaPredicted RBP5.89□□□□□ -1.47
PSME1-203ENST00000470718 ARXQ96QS3 562 aa5.88□□□□□ -1.47
PSME1-203ENST00000470718 PAXIP1Q6ZW49 1069 aaPredicted RBP5.87□□□□□ -1.47
PSME1-203ENST00000470718 PROM2Q8N271 834 aa5.87□□□□□ -1.47
PSME1-203ENST00000470718 TULP1O00294 542 aaPredicted RBP5.86□□□□□ -1.47
PSME1-203ENST00000470718 PABPN1Q86U42 306 aaKnown RBP eCLIP5.86□□□□□ -1.47
PSME1-203ENST00000470718 CFAP44Q96MT7 982 aa5.86□□□□□ -1.47
PSME1-203ENST00000470718 UNC13AQ9UPW8 1703 aa5.85□□□□□ -1.47
PSME1-203ENST00000470718 BICRAQ9NZM4 1560 aa5.84□□□□□ -1.47
PSME1-203ENST00000470718 ERICH6Q7L0X2 663 aa5.83□□□□□ -1.48
PSME1-203ENST00000470718 GTF3C3Q9Y5Q9 886 aa5.83□□□□□ -1.48
PSME1-203ENST00000470718 NPM1P06748 294 aaKnown RBP eCLIP5.82□□□□□ -1.48
PSME1-203ENST00000470718 ZNF219Q9P2Y4 722 aaPredicted RBP5.82□□□□□ -1.48
PSME1-203ENST00000470718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.81□□□□□ -1.487e-14■■■■□ 19.7
PSME1-203ENST00000470718 SPRYD3Q8NCJ5 442 aa5.79□□□□□ -1.48
PSME1-203ENST00000470718 CECR2Q9BXF3 1484 aa5.78□□□□□ -1.48
PSME1-203ENST00000470718 SUPT5HO00267 1087 aaKnown RBP5.78□□□□□ -1.48
PSME1-203ENST00000470718 ECM2O94769 699 aaPredicted RBP5.78□□□□□ -1.48
PSME1-203ENST00000470718 TSHZ2Q9NRE2 1034 aa5.78□□□□□ -1.48
PSME1-203ENST00000470718 NBR1Q14596 966 aa5.77□□□□□ -1.49
PSME1-203ENST00000470718 U3KPZ7 1027 aaPredicted RBP5.77□□□□□ -1.49
PSME1-203ENST00000470718 BAZ1AQ9NRL2 1556 aaPredicted RBP5.76□□□□□ -1.49
PSME1-203ENST00000470718 RSF1Q96T23 1441 aaPredicted RBP5.75□□□□□ -1.49
PSME1-203ENST00000470718 MKRN4PQ13434 485 aaPredicted RBP5.75□□□□□ -1.49
PSME1-203ENST00000470718 SPOCK2Q92563 424 aa5.74□□□□□ -1.49
PSME1-203ENST00000470718 MROH2BQ7Z745 1585 aa5.74□□□□□ -1.49
PSME1-203ENST00000470718 SMARCA4P51532 1647 aa5.74□□□□□ -1.49
PSME1-203ENST00000470718 HOMEZQ8IX15 550 aa5.73□□□□□ -1.49
PSME1-203ENST00000470718 DNAJC5Q9H3Z4 198 aa5.72□□□□□ -1.49
PSME1-203ENST00000470718 DCAF8L1A6NGE4 600 aa5.71□□□□□ -1.5
PSME1-203ENST00000470718 KLHL34Q8N239 644 aa5.71□□□□□ -1.5
PSME1-203ENST00000470718 RGL2O15211 777 aa5.7□□□□□ -1.5
PSME1-203ENST00000470718 APLP2Q06481 763 aa5.7□□□□□ -1.5
PSME1-203ENST00000470718 TMEM132AQ24JP5 1023 aa5.7□□□□□ -1.5
PSME1-203ENST00000470718 EIF4G1Q04637 1599 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms