RNA–Protein interactions for RNA: ENST00000561142.5

PSME1-209, Transcript of proteasome activator subunit 1, humanhuman

TSL 5

Gene PSME1, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-209ENST00000561142 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
PSME1-209ENST00000561142 ABCC9O60706 1549 aa30.17■■■□□ 2.42
PSME1-209ENST00000561142 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
PSME1-209ENST00000561142 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
PSME1-209ENST00000561142 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
PSME1-209ENST00000561142 NACADO15069 1562 aa28.36■■■□□ 2.13
PSME1-209ENST00000561142 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
PSME1-209ENST00000561142 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.14e-6■□□□□ 11
PSME1-209ENST00000561142 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
PSME1-209ENST00000561142 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
PSME1-209ENST00000561142 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
PSME1-209ENST00000561142 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
PSME1-209ENST00000561142 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
PSME1-209ENST00000561142 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
PSME1-209ENST00000561142 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
PSME1-209ENST00000561142 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
PSME1-209ENST00000561142 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
PSME1-209ENST00000561142 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
PSME1-209ENST00000561142 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
PSME1-209ENST00000561142 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
PSME1-209ENST00000561142 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
PSME1-209ENST00000561142 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
PSME1-209ENST00000561142 ERCC6Q03468 1493 aa26.01■■□□□ 1.75
PSME1-209ENST00000561142 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
PSME1-209ENST00000561142 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
PSME1-209ENST00000561142 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
PSME1-209ENST00000561142 NESP48681 1621 aa25.93■■□□□ 1.74
PSME1-209ENST00000561142 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
PSME1-209ENST00000561142 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
PSME1-209ENST00000561142 CUX2O14529 1486 aa25.85■■□□□ 1.73
PSME1-209ENST00000561142 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
PSME1-209ENST00000561142 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
PSME1-209ENST00000561142 WIZO95785 1651 aa25.57■■□□□ 1.68
PSME1-209ENST00000561142 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
PSME1-209ENST00000561142 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
PSME1-209ENST00000561142 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
PSME1-209ENST00000561142 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
PSME1-209ENST00000561142 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
PSME1-209ENST00000561142 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
PSME1-209ENST00000561142 WDR62O43379 1518 aa25.2■■□□□ 1.62
PSME1-209ENST00000561142 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
PSME1-209ENST00000561142 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
PSME1-209ENST00000561142 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
PSME1-209ENST00000561142 CFTRP13569 1480 aa25.15■■□□□ 1.62
PSME1-209ENST00000561142 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PSME1-209ENST00000561142 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
PSME1-209ENST00000561142 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
PSME1-209ENST00000561142 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
PSME1-209ENST00000561142 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
PSME1-209ENST00000561142 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
PSME1-209ENST00000561142 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
PSME1-209ENST00000561142 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
PSME1-209ENST00000561142 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
PSME1-209ENST00000561142 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
PSME1-209ENST00000561142 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
PSME1-209ENST00000561142 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.519e-8■■■■■ 27.5
PSME1-209ENST00000561142 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
PSME1-209ENST00000561142 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
PSME1-209ENST00000561142 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
PSME1-209ENST00000561142 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PSME1-209ENST00000561142 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
PSME1-209ENST00000561142 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PSME1-209ENST00000561142 FBLN2P98095 1184 aa24.4■■□□□ 1.5
PSME1-209ENST00000561142 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
PSME1-209ENST00000561142 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
PSME1-209ENST00000561142 SOGA1O94964 1423 aa24.36■■□□□ 1.49
PSME1-209ENST00000561142 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
PSME1-209ENST00000561142 CHD1O14646 1710 aa24.32■■□□□ 1.48
PSME1-209ENST00000561142 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
PSME1-209ENST00000561142 CUX1P39880 1505 aa24.31■■□□□ 1.48
PSME1-209ENST00000561142 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
PSME1-209ENST00000561142 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
PSME1-209ENST00000561142 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
PSME1-209ENST00000561142 ARAP1Q96P48 1450 aa24.14■■□□□ 1.46
PSME1-209ENST00000561142 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
PSME1-209ENST00000561142 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PSME1-209ENST00000561142 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
PSME1-209ENST00000561142 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
PSME1-209ENST00000561142 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
PSME1-209ENST00000561142 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
PSME1-209ENST00000561142 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
PSME1-209ENST00000561142 PBRM1Q86U86 1689 aa24■■□□□ 1.43
PSME1-209ENST00000561142 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
PSME1-209ENST00000561142 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
PSME1-209ENST00000561142 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
PSME1-209ENST00000561142 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
PSME1-209ENST00000561142 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
PSME1-209ENST00000561142 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
PSME1-209ENST00000561142 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
PSME1-209ENST00000561142 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
PSME1-209ENST00000561142 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
PSME1-209ENST00000561142 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
PSME1-209ENST00000561142 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PSME1-209ENST00000561142 NUP160Q12769 1436 aa23.72■■□□□ 1.39
PSME1-209ENST00000561142 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
PSME1-209ENST00000561142 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
PSME1-209ENST00000561142 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
PSME1-209ENST00000561142 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
PSME1-209ENST00000561142 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
PSME1-209ENST00000561142 IGF1RP08069 1367 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms