RNA–Protein interactions for RNA: ENST00000276431.8

TNFRSF10B-201, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 4,146 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-201ENST00000276431 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
TNFRSF10B-201ENST00000276431 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
TNFRSF10B-201ENST00000276431 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
TNFRSF10B-201ENST00000276431 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
TNFRSF10B-201ENST00000276431 HRCP23327 699 aa19.13■□□□□ 0.65
TNFRSF10B-201ENST00000276431 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
TNFRSF10B-201ENST00000276431 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
TNFRSF10B-201ENST00000276431 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
TNFRSF10B-201ENST00000276431 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
TNFRSF10B-201ENST00000276431 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
TNFRSF10B-201ENST00000276431 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
TNFRSF10B-201ENST00000276431 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF10B-201ENST00000276431 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF10B-201ENST00000276431 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
TNFRSF10B-201ENST00000276431 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
TNFRSF10B-201ENST00000276431 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
TNFRSF10B-201ENST00000276431 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
TNFRSF10B-201ENST00000276431 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF10B-201ENST00000276431 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.47
TNFRSF10B-201ENST00000276431 TRIM41Q8WV44 630 aa18■□□□□ 0.47
TNFRSF10B-201ENST00000276431 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
TNFRSF10B-201ENST00000276431 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF10B-201ENST00000276431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF10B-201ENST00000276431 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
TNFRSF10B-201ENST00000276431 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
TNFRSF10B-201ENST00000276431 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
TNFRSF10B-201ENST00000276431 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.43
TNFRSF10B-201ENST00000276431 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF10B-201ENST00000276431 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
TNFRSF10B-201ENST00000276431 ABCC9O60706 1549 aa17.5■□□□□ 0.39
TNFRSF10B-201ENST00000276431 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
TNFRSF10B-201ENST00000276431 MYT1Q01538 1121 aa17.37■□□□□ 0.37
TNFRSF10B-201ENST00000276431 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF10B-201ENST00000276431 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
TNFRSF10B-201ENST00000276431 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
TNFRSF10B-201ENST00000276431 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF10B-201ENST00000276431 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF10B-201ENST00000276431 MIER1Q8N108 512 aa17.18■□□□□ 0.34
TNFRSF10B-201ENST00000276431 NACADO15069 1562 aa17.1■□□□□ 0.33
TNFRSF10B-201ENST00000276431 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
TNFRSF10B-201ENST00000276431 APLP2Q06481 763 aa17.03■□□□□ 0.32
TNFRSF10B-201ENST00000276431 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
TNFRSF10B-201ENST00000276431 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
TNFRSF10B-201ENST00000276431 BCANQ96GW7 911 aa16.93■□□□□ 0.3
TNFRSF10B-201ENST00000276431 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
TNFRSF10B-201ENST00000276431 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.29
TNFRSF10B-201ENST00000276431 CEP162Q5TB80 1403 aa16.83■□□□□ 0.29
TNFRSF10B-201ENST00000276431 ITGAEP38570 1179 aa16.82■□□□□ 0.28
TNFRSF10B-201ENST00000276431 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
TNFRSF10B-201ENST00000276431 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF10B-201ENST00000276431 SOGA1O94964 1423 aa16.73■□□□□ 0.27
TNFRSF10B-201ENST00000276431 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
TNFRSF10B-201ENST00000276431 WIZO95785 1651 aa16.68■□□□□ 0.26
TNFRSF10B-201ENST00000276431 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
TNFRSF10B-201ENST00000276431 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
TNFRSF10B-201ENST00000276431 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
TNFRSF10B-201ENST00000276431 FKBP8Q14318 412 aa16.61■□□□□ 0.25
TNFRSF10B-201ENST00000276431 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
TNFRSF10B-201ENST00000276431 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
TNFRSF10B-201ENST00000276431 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
TNFRSF10B-201ENST00000276431 NEFLP07196 543 aa16.58■□□□□ 0.24
TNFRSF10B-201ENST00000276431 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
TNFRSF10B-201ENST00000276431 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
TNFRSF10B-201ENST00000276431 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF10B-201ENST00000276431 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
TNFRSF10B-201ENST00000276431 TRIM52Q96A61 297 aa16.49■□□□□ 0.23
TNFRSF10B-201ENST00000276431 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF10B-201ENST00000276431 CLIP1P30622 1438 aa16.49■□□□□ 0.23
TNFRSF10B-201ENST00000276431 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
TNFRSF10B-201ENST00000276431 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
TNFRSF10B-201ENST00000276431 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
TNFRSF10B-201ENST00000276431 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
TNFRSF10B-201ENST00000276431 EEA1Q15075 1411 aa16.41■□□□□ 0.22
TNFRSF10B-201ENST00000276431 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
TNFRSF10B-201ENST00000276431 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF10B-201ENST00000276431 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF10B-201ENST00000276431 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
TNFRSF10B-201ENST00000276431 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
TNFRSF10B-201ENST00000276431 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
TNFRSF10B-201ENST00000276431 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
TNFRSF10B-201ENST00000276431 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
TNFRSF10B-201ENST00000276431 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
TNFRSF10B-201ENST00000276431 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
TNFRSF10B-201ENST00000276431 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF10B-201ENST00000276431 ANP32CO43423 234 aa16.26■□□□□ 0.19
TNFRSF10B-201ENST00000276431 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
TNFRSF10B-201ENST00000276431 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
TNFRSF10B-201ENST00000276431 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
TNFRSF10B-201ENST00000276431 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFRSF10B-201ENST00000276431 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF10B-201ENST00000276431 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
TNFRSF10B-201ENST00000276431 NBR1Q14596 966 aa16.08■□□□□ 0.16
TNFRSF10B-201ENST00000276431 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
TNFRSF10B-201ENST00000276431 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
TNFRSF10B-201ENST00000276431 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
TNFRSF10B-201ENST00000276431 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
TNFRSF10B-201ENST00000276431 RAB3GAP2Q9H2M9 1393 aa16.06■□□□□ 0.16
TNFRSF10B-201ENST00000276431 MSH5O43196 834 aa16.04■□□□□ 0.16
TNFRSF10B-201ENST00000276431 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
TNFRSF10B-201ENST00000276431 POLR3GLQ9BT43 218 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms