RNA–Protein interactions for RNA: ENST00000472734.1

RCOR3-205, Transcript of REST corepressor 3, humanhuman

TSL 2

Gene RCOR3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-205ENST00000472734 NISCHQ9Y2I1 1504 aa50.3■■■■■ 5.64
RCOR3-205ENST00000472734 CCDC180Q9P1Z9 1646 aa44.28■■■■■ 4.68
RCOR3-205ENST00000472734 ABCC9O60706 1549 aa42.64■■■■■ 4.42
RCOR3-205ENST00000472734 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
RCOR3-205ENST00000472734 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
RCOR3-205ENST00000472734 DCAF1Q9Y4B6 1507 aa41.68■■■■■ 4.26
RCOR3-205ENST00000472734 MYO15BQ96JP2 1530 aa41.58■■■■■ 4.25
RCOR3-205ENST00000472734 NACADO15069 1562 aa41.52■■■■■ 4.24
RCOR3-205ENST00000472734 RB1CC1Q8TDY2 1594 aa41.35■■■■■ 4.21
RCOR3-205ENST00000472734 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
RCOR3-205ENST00000472734 UNC13AQ9UPW8 1703 aa40.34■■■■■ 4.05
RCOR3-205ENST00000472734 SHROOM4Q9ULL8 1493 aa40.16■■■■■ 4.02
RCOR3-205ENST00000472734 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
RCOR3-205ENST00000472734 PABPN1Q86U42 306 aaKnown RBP eCLIP40.04■■■■■ 4
RCOR3-205ENST00000472734 CECR2Q9BXF3 1484 aa39.11■■■■□ 3.85
RCOR3-205ENST00000472734 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
RCOR3-205ENST00000472734 BAZ1AQ9NRL2 1556 aaPredicted RBP38.9■■■■□ 3.82
RCOR3-205ENST00000472734 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
RCOR3-205ENST00000472734 MROH2BQ7Z745 1585 aa38.77■■■■□ 3.8
RCOR3-205ENST00000472734 RSF1Q96T23 1441 aaPredicted RBP38.64■■■■□ 3.78
RCOR3-205ENST00000472734 CC2D2AQ9P2K1 1620 aa38.6■■■■□ 3.77
RCOR3-205ENST00000472734 DNAJC5BQ9UF47 199 aa38.56■■■■□ 3.76
RCOR3-205ENST00000472734 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
RCOR3-205ENST00000472734 PEG3Q9GZU2 1588 aa38.47■■■■□ 3.75
RCOR3-205ENST00000472734 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
RCOR3-205ENST00000472734 NCAPD3P42695 1498 aa38.36■■■■□ 3.73
RCOR3-205ENST00000472734 WIZO95785 1651 aa38.34■■■■□ 3.73
RCOR3-205ENST00000472734 SUPT5HO00267 1087 aaKnown RBP38.22■■■■□ 3.71
RCOR3-205ENST00000472734 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
RCOR3-205ENST00000472734 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
RCOR3-205ENST00000472734 TOP2AP11388 1531 aaKnown RBP38■■■■□ 3.67
RCOR3-205ENST00000472734 CCDC88BA6NC98 1476 aa37.61■■■■□ 3.61
RCOR3-205ENST00000472734 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
RCOR3-205ENST00000472734 CFTRP13569 1480 aa37.21■■■■□ 3.55
RCOR3-205ENST00000472734 LAMC3Q9Y6N6 1575 aa37.15■■■■□ 3.54
RCOR3-205ENST00000472734 NESP48681 1621 aa37.14■■■■□ 3.54
RCOR3-205ENST00000472734 PDS5BQ9NTI5 1447 aa36.92■■■■□ 3.5
RCOR3-205ENST00000472734 PRDM2Q13029 1718 aa36.82■■■■□ 3.48
RCOR3-205ENST00000472734 FANCD2Q9BXW9 1451 aa36.81■■■■□ 3.48
RCOR3-205ENST00000472734 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
RCOR3-205ENST00000472734 CEP164Q9UPV0 1460 aa36.66■■■■□ 3.46
RCOR3-205ENST00000472734 KIF21AQ7Z4S6 1674 aa36.64■■■■□ 3.46
RCOR3-205ENST00000472734 MRC2Q9UBG0 1479 aa36.46■■■■□ 3.43
RCOR3-205ENST00000472734 URB2Q14146 1524 aaKnown RBP36.39■■■■□ 3.42
RCOR3-205ENST00000472734 ABCC8Q09428 1581 aa36.39■■■■□ 3.42
RCOR3-205ENST00000472734 WRNQ14191 1432 aaPredicted RBP eCLIP36.38■■■■□ 3.41
RCOR3-205ENST00000472734 THOC2Q8NI27 1593 aaKnown RBP36.36■■■■□ 3.41
RCOR3-205ENST00000472734 CUX1P39880 1505 aa36.32■■■■□ 3.4
RCOR3-205ENST00000472734 WDR62O43379 1518 aa36.3■■■■□ 3.4
RCOR3-205ENST00000472734 TOPBP1Q92547 1522 aa36.3■■■■□ 3.4
RCOR3-205ENST00000472734 DNMBPQ6XZF7 1577 aa36.3■■■■□ 3.4
RCOR3-205ENST00000472734 SYNJ1O43426 1573 aa36.21■■■■□ 3.39
RCOR3-205ENST00000472734 CHIC1Q5VXU3 224 aa36.19■■■■□ 3.38
RCOR3-205ENST00000472734 TOP2BQ02880 1626 aa36.19■■■■□ 3.38
RCOR3-205ENST00000472734 BIVM-ERCC5R4GMW8 1640 aa36.16■■■■□ 3.38
RCOR3-205ENST00000472734 TRIM41Q8WV44 630 aa36.09■■■■□ 3.37
RCOR3-205ENST00000472734 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
RCOR3-205ENST00000472734 CUX2O14529 1486 aa36.05■■■■□ 3.36
RCOR3-205ENST00000472734 POLA1P09884 1462 aaPredicted RBP36.05■■■■□ 3.36
RCOR3-205ENST00000472734 SOGA1O94964 1423 aa35.95■■■■□ 3.35
RCOR3-205ENST00000472734 IFT140Q96RY7 1462 aa35.89■■■■□ 3.34
RCOR3-205ENST00000472734 RAD54L2Q9Y4B4 1467 aa35.89■■■■□ 3.34
RCOR3-205ENST00000472734 TARBP1Q13395 1621 aaKnown RBP35.83■■■■□ 3.33
RCOR3-205ENST00000472734 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
RCOR3-205ENST00000472734 WDR97A6NE52 1622 aa35.66■■■■□ 3.3
RCOR3-205ENST00000472734 ZNF608Q9ULD9 1512 aaPredicted RBP35.66■■■■□ 3.3
RCOR3-205ENST00000472734 TDRD9Q8NDG6 1382 aaKnown RBP35.65■■■■□ 3.3
RCOR3-205ENST00000472734 AQRO60306 1485 aaKnown RBP eCLIP35.58■■■■□ 3.293e-6■■■□□ 18
RCOR3-205ENST00000472734 KIF27Q86VH2 1401 aa35.57■■■■□ 3.28
RCOR3-205ENST00000472734 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
RCOR3-205ENST00000472734 ABCA5Q8WWZ7 1642 aa35.51■■■■□ 3.28
RCOR3-205ENST00000472734 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
RCOR3-205ENST00000472734 EIF4G3O43432 1585 aaKnown RBP35.48■■■■□ 3.27
RCOR3-205ENST00000472734 EEA1Q15075 1411 aa35.41■■■■□ 3.26
RCOR3-205ENST00000472734 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
RCOR3-205ENST00000472734 IGF1RP08069 1367 aa35.4■■■■□ 3.26
RCOR3-205ENST00000472734 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
RCOR3-205ENST00000472734 CSRNP3Q8WYN3 585 aa35.31■■■■□ 3.24
RCOR3-205ENST00000472734 PBRM1Q86U86 1689 aa35.29■■■■□ 3.24
RCOR3-205ENST00000472734 FAM9AQ8IZU1 332 aaPredicted RBP35.28■■■■□ 3.24
RCOR3-205ENST00000472734 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
RCOR3-205ENST00000472734 MAGI1Q96QZ7 1491 aaPredicted RBP35.22■■■■□ 3.23
RCOR3-205ENST00000472734 CARMIL1Q5VZK9 1371 aa35.17■■■■□ 3.22
RCOR3-205ENST00000472734 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
RCOR3-205ENST00000472734 CUL7Q14999 1698 aa35.11■■■■□ 3.21
RCOR3-205ENST00000472734 PRXQ9BXM0 1461 aa35.11■■■■□ 3.21
RCOR3-205ENST00000472734 ADAMTS12P58397 1594 aa35.1■■■■□ 3.21
RCOR3-205ENST00000472734 SYNJ2O15056 1496 aa35.08■■■■□ 3.21
RCOR3-205ENST00000472734 CHMP7Q8WUX9 453 aaPredicted RBP35.04■■■■□ 3.2
RCOR3-205ENST00000472734 RAPGEF2Q9Y4G8 1499 aa35.02■■■■□ 3.2
RCOR3-205ENST00000472734 FBLN2P98095 1184 aa34.98■■■■□ 3.19
RCOR3-205ENST00000472734 GRIN2AQ12879 1464 aa34.94■■■■□ 3.18
RCOR3-205ENST00000472734 KIF21BO75037 1637 aa34.93■■■■□ 3.18
RCOR3-205ENST00000472734 CHD1O14646 1710 aa34.85■■■■□ 3.17
RCOR3-205ENST00000472734 GOLGA3Q08378 1498 aa34.8■■■■□ 3.16
RCOR3-205ENST00000472734 NUP160Q12769 1436 aa34.79■■■■□ 3.16
RCOR3-205ENST00000472734 OSCARQ8IYS5 282 aa34.76■■■■□ 3.16
RCOR3-205ENST00000472734 EHMT2Q96KQ7 1210 aa34.73■■■■□ 3.15
RCOR3-205ENST00000472734 CEP170Q5SW79 1584 aa34.71■■■■□ 3.15
RCOR3-205ENST00000472734 LOC105371045A0A1W2PR82 267 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms