RNA–Protein interactions for RNA: ENST00000502906.5

FGFR4-207, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 2,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-207ENST00000502906 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
FGFR4-207ENST00000502906 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
FGFR4-207ENST00000502906 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
FGFR4-207ENST00000502906 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
FGFR4-207ENST00000502906 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
FGFR4-207ENST00000502906 SUPT5HO00267 1087 aaKnown RBP30.75■■■□□ 2.51
FGFR4-207ENST00000502906 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
FGFR4-207ENST00000502906 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
FGFR4-207ENST00000502906 ABCC9O60706 1549 aa29.78■■■□□ 2.36
FGFR4-207ENST00000502906 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.35
FGFR4-207ENST00000502906 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
FGFR4-207ENST00000502906 NACADO15069 1562 aa29.45■■■□□ 2.3
FGFR4-207ENST00000502906 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
FGFR4-207ENST00000502906 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
FGFR4-207ENST00000502906 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
FGFR4-207ENST00000502906 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
FGFR4-207ENST00000502906 LOC105371045A0A1W2PR82 267 aa28.84■■■□□ 2.21
FGFR4-207ENST00000502906 WIZO95785 1651 aa28.77■■■□□ 2.2
FGFR4-207ENST00000502906 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
FGFR4-207ENST00000502906 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
FGFR4-207ENST00000502906 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
FGFR4-207ENST00000502906 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
FGFR4-207ENST00000502906 FAM9AQ8IZU1 332 aaPredicted RBP28.44■■■□□ 2.14
FGFR4-207ENST00000502906 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.146e-7■□□□□ 10.4
FGFR4-207ENST00000502906 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
FGFR4-207ENST00000502906 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
FGFR4-207ENST00000502906 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
FGFR4-207ENST00000502906 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
FGFR4-207ENST00000502906 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
FGFR4-207ENST00000502906 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
FGFR4-207ENST00000502906 HRCP23327 699 aa28.16■■■□□ 2.1
FGFR4-207ENST00000502906 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
FGFR4-207ENST00000502906 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
FGFR4-207ENST00000502906 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
FGFR4-207ENST00000502906 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
FGFR4-207ENST00000502906 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
FGFR4-207ENST00000502906 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
FGFR4-207ENST00000502906 BAZ1BQ9UIG0 1483 aaKnown RBP27.67■■■□□ 2.02
FGFR4-207ENST00000502906 SOGA1O94964 1423 aa27.67■■■□□ 2.02
FGFR4-207ENST00000502906 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
FGFR4-207ENST00000502906 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
FGFR4-207ENST00000502906 CSRNP3Q8WYN3 585 aa27.45■■□□□ 1.98
FGFR4-207ENST00000502906 SYNJ1O43426 1573 aa27.45■■□□□ 1.98
FGFR4-207ENST00000502906 EEA1Q15075 1411 aa27.39■■□□□ 1.97
FGFR4-207ENST00000502906 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
FGFR4-207ENST00000502906 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
FGFR4-207ENST00000502906 TNIKQ9UKE5 1360 aa27.31■■□□□ 1.96
FGFR4-207ENST00000502906 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
FGFR4-207ENST00000502906 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
FGFR4-207ENST00000502906 GOLGA3Q08378 1498 aa27.22■■□□□ 1.95
FGFR4-207ENST00000502906 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
FGFR4-207ENST00000502906 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
FGFR4-207ENST00000502906 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
FGFR4-207ENST00000502906 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
FGFR4-207ENST00000502906 KIF21BO75037 1637 aa27.07■■□□□ 1.92
FGFR4-207ENST00000502906 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
FGFR4-207ENST00000502906 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
FGFR4-207ENST00000502906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.96■■□□□ 1.91
FGFR4-207ENST00000502906 CFTRP13569 1480 aa26.95■■□□□ 1.9
FGFR4-207ENST00000502906 CUX1P39880 1505 aa26.95■■□□□ 1.9
FGFR4-207ENST00000502906 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
FGFR4-207ENST00000502906 CLIP1P30622 1438 aa26.92■■□□□ 1.9
FGFR4-207ENST00000502906 CCER1Q8TC90 406 aaPredicted RBP26.83■■□□□ 1.89
FGFR4-207ENST00000502906 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
FGFR4-207ENST00000502906 PRXQ9BXM0 1461 aa26.74■■□□□ 1.87
FGFR4-207ENST00000502906 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
FGFR4-207ENST00000502906 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
FGFR4-207ENST00000502906 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
FGFR4-207ENST00000502906 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
FGFR4-207ENST00000502906 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
FGFR4-207ENST00000502906 APLP2Q06481 763 aa26.61■■□□□ 1.85
FGFR4-207ENST00000502906 CUX2O14529 1486 aa26.56■■□□□ 1.84
FGFR4-207ENST00000502906 HNRNPUL2Q1KMD3 747 aaKnown RBP26.54■■□□□ 1.84
FGFR4-207ENST00000502906 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
FGFR4-207ENST00000502906 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
FGFR4-207ENST00000502906 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
FGFR4-207ENST00000502906 IGF1RP08069 1367 aa26.46■■□□□ 1.83
FGFR4-207ENST00000502906 NESP48681 1621 aa26.44■■□□□ 1.82
FGFR4-207ENST00000502906 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
FGFR4-207ENST00000502906 ARHGAP35Q9NRY4 1499 aa26.37■■□□□ 1.81
FGFR4-207ENST00000502906 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
FGFR4-207ENST00000502906 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
FGFR4-207ENST00000502906 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
FGFR4-207ENST00000502906 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
FGFR4-207ENST00000502906 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
FGFR4-207ENST00000502906 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
FGFR4-207ENST00000502906 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
FGFR4-207ENST00000502906 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
FGFR4-207ENST00000502906 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
FGFR4-207ENST00000502906 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
FGFR4-207ENST00000502906 DIEXFQ68CQ4 756 aaKnown RBP26.08■■□□□ 1.77
FGFR4-207ENST00000502906 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
FGFR4-207ENST00000502906 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.75
FGFR4-207ENST00000502906 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
FGFR4-207ENST00000502906 ITGAEP38570 1179 aa26■■□□□ 1.75
FGFR4-207ENST00000502906 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
FGFR4-207ENST00000502906 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
FGFR4-207ENST00000502906 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
FGFR4-207ENST00000502906 ZNF316A6NFI3 1004 aaPredicted RBP25.98■■□□□ 1.75
FGFR4-207ENST00000502906 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms