RNA–Protein interactions for RNA: ENST00000437404.2

STAU1-208, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

TSL 1 (best)

Gene STAU1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-208ENST00000437404 NISCHQ9Y2I1 1504 aa50.86■■■■■ 5.73
STAU1-208ENST00000437404 CCDC180Q9P1Z9 1646 aa45.55■■■■■ 4.88
STAU1-208ENST00000437404 ABCC9O60706 1549 aa45.05■■■■■ 4.8
STAU1-208ENST00000437404 RB1CC1Q8TDY2 1594 aa43.15■■■■■ 4.5
STAU1-208ENST00000437404 NACADO15069 1562 aa42.95■■■■■ 4.47
STAU1-208ENST00000437404 DCAF8L2P0C7V8 631 aa42.69■■■■■ 4.42
STAU1-208ENST00000437404 MYO15BQ96JP2 1530 aa42.5■■■■■ 4.39
STAU1-208ENST00000437404 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
STAU1-208ENST00000437404 UNC13AQ9UPW8 1703 aa42.16■■■■■ 4.34
STAU1-208ENST00000437404 DCAF1Q9Y4B6 1507 aa42.09■■■■■ 4.33
STAU1-208ENST00000437404 PABPN1Q86U42 306 aaKnown RBP eCLIP41.94■■■■■ 4.3
STAU1-208ENST00000437404 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
STAU1-208ENST00000437404 BICRAQ9NZM4 1560 aa41.8■■■■■ 4.28
STAU1-208ENST00000437404 SCRIBQ14160 1630 aa41.45■■■■■ 4.23
STAU1-208ENST00000437404 SHROOM4Q9ULL8 1493 aa41.4■■■■■ 4.22
STAU1-208ENST00000437404 EIF4G1Q04637 1599 aaKnown RBP40.78■■■■■ 4.12
STAU1-208ENST00000437404 CC2D2AQ9P2K1 1620 aa40.76■■■■■ 4.12
STAU1-208ENST00000437404 CECR2Q9BXF3 1484 aa40.57■■■■■ 4.08
STAU1-208ENST00000437404 SMARCA4P51532 1647 aa39.61■■■■□ 3.93
STAU1-208ENST00000437404 NCAPD3P42695 1498 aa39.59■■■■□ 3.93
STAU1-208ENST00000437404 ATAD2BQ9ULI0 1458 aa39.52■■■■□ 3.92
STAU1-208ENST00000437404 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
STAU1-208ENST00000437404 SMARCA2P51531 1590 aa39.49■■■■□ 3.91
STAU1-208ENST00000437404 HMGXB3Q12766 1538 aa39.38■■■■□ 3.89
STAU1-208ENST00000437404 PEG3Q9GZU2 1588 aa39.25■■■■□ 3.87
STAU1-208ENST00000437404 BAZ1BQ9UIG0 1483 aaKnown RBP39.18■■■■□ 3.86
STAU1-208ENST00000437404 MROH2BQ7Z745 1585 aa39.16■■■■□ 3.86
STAU1-208ENST00000437404 ERCC6Q03468 1493 aa38.92■■■■□ 3.82
STAU1-208ENST00000437404 NESP48681 1621 aa38.78■■■■□ 3.8
STAU1-208ENST00000437404 CUX2O14529 1486 aa38.73■■■■□ 3.79
STAU1-208ENST00000437404 WIZO95785 1651 aa38.73■■■■□ 3.79
STAU1-208ENST00000437404 LAMC3Q9Y6N6 1575 aa38.69■■■■□ 3.78
STAU1-208ENST00000437404 RSF1Q96T23 1441 aaPredicted RBP38.48■■■■□ 3.75
STAU1-208ENST00000437404 PDS5BQ9NTI5 1447 aa38.43■■■■□ 3.74
STAU1-208ENST00000437404 CADPSQ9ULU8 1353 aa38.4■■■■□ 3.74
STAU1-208ENST00000437404 THOC2Q8NI27 1593 aaKnown RBP38.39■■■■□ 3.74
STAU1-208ENST00000437404 KIF21AQ7Z4S6 1674 aa38.38■■■■□ 3.73
STAU1-208ENST00000437404 TOP2AP11388 1531 aaKnown RBP38.31■■■■□ 3.72
STAU1-208ENST00000437404 DNAJC5Q9H3Z4 198 aa38.18■■■■□ 3.7
STAU1-208ENST00000437404 CFTRP13569 1480 aa38.06■■■■□ 3.68
STAU1-208ENST00000437404 MRC2Q9UBG0 1479 aa38.06■■■■□ 3.68
STAU1-208ENST00000437404 CEP164Q9UPV0 1460 aa38■■■■□ 3.67
STAU1-208ENST00000437404 FANCD2Q9BXW9 1451 aa37.97■■■■□ 3.67
STAU1-208ENST00000437404 WDR62O43379 1518 aa37.97■■■■□ 3.67
STAU1-208ENST00000437404 PRDM2Q13029 1718 aa37.82■■■■□ 3.65
STAU1-208ENST00000437404 CCDC88BA6NC98 1476 aa37.82■■■■□ 3.64
STAU1-208ENST00000437404 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
STAU1-208ENST00000437404 ABCC8Q09428 1581 aa37.31■■■■□ 3.56
STAU1-208ENST00000437404 TOPBP1Q92547 1522 aa37.3■■■■□ 3.56
STAU1-208ENST00000437404 DNMBPQ6XZF7 1577 aa37.23■■■■□ 3.55
STAU1-208ENST00000437404 IFT140Q96RY7 1462 aa37.23■■■■□ 3.55
STAU1-208ENST00000437404 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
STAU1-208ENST00000437404 SUPT5HO00267 1087 aaKnown RBP37.05■■■■□ 3.52
STAU1-208ENST00000437404 OSCARQ8IYS5 282 aa36.98■■■■□ 3.51
STAU1-208ENST00000437404 EIF4G3O43432 1585 aaKnown RBP36.95■■■■□ 3.51
STAU1-208ENST00000437404 TARBP1Q13395 1621 aaKnown RBP36.94■■■■□ 3.5
STAU1-208ENST00000437404 POLA1P09884 1462 aaPredicted RBP36.94■■■■□ 3.5
STAU1-208ENST00000437404 CUX1P39880 1505 aa36.78■■■■□ 3.48
STAU1-208ENST00000437404 SOGA1O94964 1423 aa36.77■■■■□ 3.48
STAU1-208ENST00000437404 AQRO60306 1485 aaKnown RBP eCLIP36.77■■■■□ 3.481e-7■■■■□ 24.1
STAU1-208ENST00000437404 FGD5Q6ZNL6 1462 aa36.76■■■■□ 3.48
STAU1-208ENST00000437404 RAD54L2Q9Y4B4 1467 aa36.75■■■■□ 3.47
STAU1-208ENST00000437404 WDR97A6NE52 1622 aa36.69■■■■□ 3.46
STAU1-208ENST00000437404 TRIM41Q8WV44 630 aa36.65■■■■□ 3.46
STAU1-208ENST00000437404 TDRD9Q8NDG6 1382 aaKnown RBP36.61■■■■□ 3.45
STAU1-208ENST00000437404 CHD1O14646 1710 aa36.6■■■■□ 3.45
STAU1-208ENST00000437404 RIMBP3CA6NJZ7 1639 aa36.48■■■■□ 3.43
STAU1-208ENST00000437404 RIMBP3BA6NNM3 1639 aa36.48■■■■□ 3.43
STAU1-208ENST00000437404 RIMBP3Q9UFD9 1639 aa36.48■■■■□ 3.43
STAU1-208ENST00000437404 FBLN2P98095 1184 aa36.47■■■■□ 3.43
STAU1-208ENST00000437404 SNAPC4Q5SXM2 1469 aa36.45■■■■□ 3.43
STAU1-208ENST00000437404 GRIN2BQ13224 1484 aa36.43■■■■□ 3.42
STAU1-208ENST00000437404 MAGI1Q96QZ7 1491 aaPredicted RBP36.42■■■■□ 3.42
STAU1-208ENST00000437404 ARHGEF11O15085 1522 aa36.4■■■■□ 3.42
STAU1-208ENST00000437404 ABCA10Q8WWZ4 1543 aa36.39■■■■□ 3.42
STAU1-208ENST00000437404 BIVM-ERCC5R4GMW8 1640 aa36.36■■■■□ 3.41
STAU1-208ENST00000437404 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
STAU1-208ENST00000437404 GAPVD1Q14C86 1478 aa36.35■■■■□ 3.41
STAU1-208ENST00000437404 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
STAU1-208ENST00000437404 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
STAU1-208ENST00000437404 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.4
STAU1-208ENST00000437404 CHMP7Q8WUX9 453 aaPredicted RBP36.29■■■■□ 3.4
STAU1-208ENST00000437404 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
STAU1-208ENST00000437404 SYNJ2O15056 1496 aa36.27■■■■□ 3.4
STAU1-208ENST00000437404 CLASP1Q7Z460 1538 aa36.17■■■■□ 3.38
STAU1-208ENST00000437404 CYB5RLQ6IPT4 315 aa36.06■■■■□ 3.36
STAU1-208ENST00000437404 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
STAU1-208ENST00000437404 ADAMTS12P58397 1594 aa36.01■■■■□ 3.35
STAU1-208ENST00000437404 ERICH3Q5RHP9 1530 aa35.97■■■■□ 3.35
STAU1-208ENST00000437404 GRIN2AQ12879 1464 aa35.96■■■■□ 3.35
STAU1-208ENST00000437404 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
STAU1-208ENST00000437404 NUP160Q12769 1436 aa35.82■■■■□ 3.32
STAU1-208ENST00000437404 CEP170Q5SW79 1584 aa35.8■■■■□ 3.32
STAU1-208ENST00000437404 SHROOM2Q13796 1616 aa35.65■■■■□ 3.3
STAU1-208ENST00000437404 KIF27Q86VH2 1401 aa35.64■■■■□ 3.3
STAU1-208ENST00000437404 ERCC6L2Q5T890 1561 aa35.58■■■■□ 3.29
STAU1-208ENST00000437404 CUL7Q14999 1698 aa35.56■■■■□ 3.28
STAU1-208ENST00000437404 TRHP20396 242 aaPredicted RBP35.55■■■■□ 3.28
STAU1-208ENST00000437404 IGF1RP08069 1367 aa35.52■■■■□ 3.28
STAU1-208ENST00000437404 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms