RNA–Protein interactions for RNA: ENST00000523504.5

TNFRSF10B-207, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-207ENST00000523504 NISCHQ9Y2I1 1504 aa51.33■■■■■ 5.81
TNFRSF10B-207ENST00000523504 CCDC180Q9P1Z9 1646 aa45.31■■■■■ 4.84
TNFRSF10B-207ENST00000523504 ABCC9O60706 1549 aa43.67■■■■■ 4.58
TNFRSF10B-207ENST00000523504 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
TNFRSF10B-207ENST00000523504 DCAF8L2P0C7V8 631 aa42.58■■■■■ 4.41
TNFRSF10B-207ENST00000523504 DCAF1Q9Y4B6 1507 aa42.41■■■■■ 4.38
TNFRSF10B-207ENST00000523504 NACADO15069 1562 aa42.35■■■■■ 4.37
TNFRSF10B-207ENST00000523504 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.36
TNFRSF10B-207ENST00000523504 RB1CC1Q8TDY2 1594 aa42.24■■■■■ 4.35
TNFRSF10B-207ENST00000523504 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
TNFRSF10B-207ENST00000523504 SCRIBQ14160 1630 aa41.53■■■■■ 4.24
TNFRSF10B-207ENST00000523504 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
TNFRSF10B-207ENST00000523504 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
TNFRSF10B-207ENST00000523504 PABPN1Q86U42 306 aaKnown RBP eCLIP40.93■■■■■ 4.14
TNFRSF10B-207ENST00000523504 CECR2Q9BXF3 1484 aa39.99■■■■□ 3.99
TNFRSF10B-207ENST00000523504 EIF4G1Q04637 1599 aaKnown RBP39.87■■■■□ 3.97
TNFRSF10B-207ENST00000523504 SMARCA4P51532 1647 aa39.72■■■■□ 3.95
TNFRSF10B-207ENST00000523504 BAZ1AQ9NRL2 1556 aaPredicted RBP39.7■■■■□ 3.95
TNFRSF10B-207ENST00000523504 MROH2BQ7Z745 1585 aa39.65■■■■□ 3.94
TNFRSF10B-207ENST00000523504 CC2D2AQ9P2K1 1620 aa39.55■■■■□ 3.92
TNFRSF10B-207ENST00000523504 DNAJC5BQ9UF47 199 aa39.41■■■■□ 3.9
TNFRSF10B-207ENST00000523504 RSF1Q96T23 1441 aaPredicted RBP39.4■■■■□ 3.9
TNFRSF10B-207ENST00000523504 WIZO95785 1651 aa39.33■■■■□ 3.89
TNFRSF10B-207ENST00000523504 ATAD2BQ9ULI0 1458 aa39.25■■■■□ 3.87
TNFRSF10B-207ENST00000523504 PEG3Q9GZU2 1588 aa39.25■■■■□ 3.87
TNFRSF10B-207ENST00000523504 SMARCA2P51531 1590 aa39.2■■■■□ 3.87
TNFRSF10B-207ENST00000523504 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
TNFRSF10B-207ENST00000523504 SUPT5HO00267 1087 aaKnown RBP39■■■■□ 3.83
TNFRSF10B-207ENST00000523504 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
TNFRSF10B-207ENST00000523504 BAZ1BQ9UIG0 1483 aaKnown RBP38.97■■■■□ 3.83
TNFRSF10B-207ENST00000523504 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
TNFRSF10B-207ENST00000523504 CCDC88BA6NC98 1476 aa38.38■■■■□ 3.74
TNFRSF10B-207ENST00000523504 NESP48681 1621 aa38.06■■■■□ 3.68
TNFRSF10B-207ENST00000523504 CADPSQ9ULU8 1353 aa37.95■■■■□ 3.67
TNFRSF10B-207ENST00000523504 LAMC3Q9Y6N6 1575 aa37.95■■■■□ 3.67
TNFRSF10B-207ENST00000523504 CFTRP13569 1480 aa37.92■■■■□ 3.66
TNFRSF10B-207ENST00000523504 PRDM2Q13029 1718 aa37.86■■■■□ 3.65
TNFRSF10B-207ENST00000523504 KIF21AQ7Z4S6 1674 aa37.69■■■■□ 3.62
TNFRSF10B-207ENST00000523504 PDS5BQ9NTI5 1447 aa37.59■■■■□ 3.61
TNFRSF10B-207ENST00000523504 FANCD2Q9BXW9 1451 aa37.58■■■■□ 3.61
TNFRSF10B-207ENST00000523504 ERCC6Q03468 1493 aa37.5■■■■□ 3.59
TNFRSF10B-207ENST00000523504 CEP164Q9UPV0 1460 aa37.46■■■■□ 3.59
TNFRSF10B-207ENST00000523504 ABCC8Q09428 1581 aa37.33■■■■□ 3.57
TNFRSF10B-207ENST00000523504 THOC2Q8NI27 1593 aaKnown RBP37.31■■■■□ 3.56
TNFRSF10B-207ENST00000523504 MRC2Q9UBG0 1479 aa37.24■■■■□ 3.55
TNFRSF10B-207ENST00000523504 URB2Q14146 1524 aaKnown RBP37.23■■■■□ 3.55
TNFRSF10B-207ENST00000523504 CUX1P39880 1505 aa37.15■■■■□ 3.54
TNFRSF10B-207ENST00000523504 WDR62O43379 1518 aa37.13■■■■□ 3.53
TNFRSF10B-207ENST00000523504 SYNJ1O43426 1573 aa37.11■■■■□ 3.53
TNFRSF10B-207ENST00000523504 DNMBPQ6XZF7 1577 aa37.11■■■■□ 3.53
TNFRSF10B-207ENST00000523504 TOPBP1Q92547 1522 aa37.1■■■■□ 3.53
TNFRSF10B-207ENST00000523504 WRNQ14191 1432 aaPredicted RBP eCLIP37.09■■■■□ 3.53
TNFRSF10B-207ENST00000523504 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
TNFRSF10B-207ENST00000523504 TOP2BQ02880 1626 aa36.99■■■■□ 3.51
TNFRSF10B-207ENST00000523504 FGD5Q6ZNL6 1462 aa36.87■■■■□ 3.49
TNFRSF10B-207ENST00000523504 POLA1P09884 1462 aaPredicted RBP36.84■■■■□ 3.49
TNFRSF10B-207ENST00000523504 CHIC1Q5VXU3 224 aa36.81■■■■□ 3.48
TNFRSF10B-207ENST00000523504 CUX2O14529 1486 aa36.78■■■■□ 3.48
TNFRSF10B-207ENST00000523504 RAD54L2Q9Y4B4 1467 aa36.72■■■■□ 3.47
TNFRSF10B-207ENST00000523504 TRIM41Q8WV44 630 aa36.71■■■■□ 3.47
TNFRSF10B-207ENST00000523504 TARBP1Q13395 1621 aaKnown RBP36.68■■■■□ 3.46
TNFRSF10B-207ENST00000523504 SOGA1O94964 1423 aa36.64■■■■□ 3.46
TNFRSF10B-207ENST00000523504 WDR97A6NE52 1622 aa36.62■■■■□ 3.45
TNFRSF10B-207ENST00000523504 IFT140Q96RY7 1462 aa36.6■■■■□ 3.45
TNFRSF10B-207ENST00000523504 ZNF608Q9ULD9 1512 aaPredicted RBP36.5■■■■□ 3.43
TNFRSF10B-207ENST00000523504 ABCA10Q8WWZ4 1543 aa36.49■■■■□ 3.43
TNFRSF10B-207ENST00000523504 EIF4G3O43432 1585 aaKnown RBP36.42■■■■□ 3.42
TNFRSF10B-207ENST00000523504 TDRD9Q8NDG6 1382 aaKnown RBP36.39■■■■□ 3.42
TNFRSF10B-207ENST00000523504 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
TNFRSF10B-207ENST00000523504 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.414e-7■■■■□ 26.3
TNFRSF10B-207ENST00000523504 RUSC2Q8N2Y8 1516 aa36.32■■■■□ 3.41
TNFRSF10B-207ENST00000523504 PBRM1Q86U86 1689 aa36.27■■■■□ 3.4
TNFRSF10B-207ENST00000523504 GAPVD1Q14C86 1478 aa36.25■■■■□ 3.39
TNFRSF10B-207ENST00000523504 KIF27Q86VH2 1401 aa36.22■■■■□ 3.39
TNFRSF10B-207ENST00000523504 GRIN2BQ13224 1484 aa36.1■■■■□ 3.37
TNFRSF10B-207ENST00000523504 FAM9AQ8IZU1 332 aaPredicted RBP36.06■■■■□ 3.36
TNFRSF10B-207ENST00000523504 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
TNFRSF10B-207ENST00000523504 SNAPC4Q5SXM2 1469 aa36.04■■■■□ 3.36
TNFRSF10B-207ENST00000523504 IGF1RP08069 1367 aa36.01■■■■□ 3.35
TNFRSF10B-207ENST00000523504 EEA1Q15075 1411 aa35.96■■■■□ 3.35
TNFRSF10B-207ENST00000523504 ADAMTS12P58397 1594 aa35.96■■■■□ 3.35
TNFRSF10B-207ENST00000523504 CUL7Q14999 1698 aa35.93■■■■□ 3.34
TNFRSF10B-207ENST00000523504 MAGI1Q96QZ7 1491 aaPredicted RBP35.93■■■■□ 3.34
TNFRSF10B-207ENST00000523504 CHD1O14646 1710 aa35.87■■■■□ 3.33
TNFRSF10B-207ENST00000523504 CSRNP3Q8WYN3 585 aa35.86■■■■□ 3.33
TNFRSF10B-207ENST00000523504 FHAD1B1AJZ9 1412 aa35.81■■■■□ 3.32
TNFRSF10B-207ENST00000523504 SYNJ2O15056 1496 aa35.8■■■■□ 3.32
TNFRSF10B-207ENST00000523504 CARMIL1Q5VZK9 1371 aa35.8■■■■□ 3.32
TNFRSF10B-207ENST00000523504 PRXQ9BXM0 1461 aa35.77■■■■□ 3.32
TNFRSF10B-207ENST00000523504 FBLN2P98095 1184 aa35.72■■■■□ 3.31
TNFRSF10B-207ENST00000523504 KIF21BO75037 1637 aa35.7■■■■□ 3.3
TNFRSF10B-207ENST00000523504 GRIN2AQ12879 1464 aa35.69■■■■□ 3.3
TNFRSF10B-207ENST00000523504 RAPGEF2Q9Y4G8 1499 aa35.69■■■■□ 3.3
TNFRSF10B-207ENST00000523504 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
TNFRSF10B-207ENST00000523504 EHMT2Q96KQ7 1210 aa35.64■■■■□ 3.3
TNFRSF10B-207ENST00000523504 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
TNFRSF10B-207ENST00000523504 GOLGA3Q08378 1498 aa35.49■■■■□ 3.27
TNFRSF10B-207ENST00000523504 NUP160Q12769 1436 aa35.48■■■■□ 3.27
TNFRSF10B-207ENST00000523504 CTTNBP2Q8WZ74 1663 aa35.46■■■■□ 3.27
TNFRSF10B-207ENST00000523504 LOC105371045A0A1W2PR82 267 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms