RNA–Protein interactions for RNA: ENST00000439930.7

PCBP2-204, Transcript of poly(rC) binding protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCBP2, Length 1,296 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-204ENST00000439930 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
PCBP2-204ENST00000439930 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
PCBP2-204ENST00000439930 ABCC9O60706 1549 aa23.13■■□□□ 1.29
PCBP2-204ENST00000439930 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
PCBP2-204ENST00000439930 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
PCBP2-204ENST00000439930 NACADO15069 1562 aa22.1■■□□□ 1.13
PCBP2-204ENST00000439930 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
PCBP2-204ENST00000439930 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
PCBP2-204ENST00000439930 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
PCBP2-204ENST00000439930 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
PCBP2-204ENST00000439930 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCBP2-204ENST00000439930 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
PCBP2-204ENST00000439930 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
PCBP2-204ENST00000439930 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
PCBP2-204ENST00000439930 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
PCBP2-204ENST00000439930 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
PCBP2-204ENST00000439930 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
PCBP2-204ENST00000439930 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
PCBP2-204ENST00000439930 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
PCBP2-204ENST00000439930 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
PCBP2-204ENST00000439930 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
PCBP2-204ENST00000439930 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
PCBP2-204ENST00000439930 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
PCBP2-204ENST00000439930 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
PCBP2-204ENST00000439930 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
PCBP2-204ENST00000439930 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
PCBP2-204ENST00000439930 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
PCBP2-204ENST00000439930 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
PCBP2-204ENST00000439930 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
PCBP2-204ENST00000439930 WIZO95785 1651 aa20.23■□□□□ 0.83
PCBP2-204ENST00000439930 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
PCBP2-204ENST00000439930 NESP48681 1621 aa20.01■□□□□ 0.79
PCBP2-204ENST00000439930 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
PCBP2-204ENST00000439930 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
PCBP2-204ENST00000439930 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
PCBP2-204ENST00000439930 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
PCBP2-204ENST00000439930 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
PCBP2-204ENST00000439930 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
PCBP2-204ENST00000439930 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
PCBP2-204ENST00000439930 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
PCBP2-204ENST00000439930 CFTRP13569 1480 aa19.7■□□□□ 0.74
PCBP2-204ENST00000439930 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
PCBP2-204ENST00000439930 CUX2O14529 1486 aa19.64■□□□□ 0.73
PCBP2-204ENST00000439930 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
PCBP2-204ENST00000439930 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
PCBP2-204ENST00000439930 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
PCBP2-204ENST00000439930 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
PCBP2-204ENST00000439930 WDR62O43379 1518 aa19.5■□□□□ 0.71
PCBP2-204ENST00000439930 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
PCBP2-204ENST00000439930 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
PCBP2-204ENST00000439930 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
PCBP2-204ENST00000439930 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
PCBP2-204ENST00000439930 CUX1P39880 1505 aa19.19■□□□□ 0.66
PCBP2-204ENST00000439930 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
PCBP2-204ENST00000439930 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
PCBP2-204ENST00000439930 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
PCBP2-204ENST00000439930 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
PCBP2-204ENST00000439930 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
PCBP2-204ENST00000439930 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
PCBP2-204ENST00000439930 SOGA1O94964 1423 aa19.07■□□□□ 0.64
PCBP2-204ENST00000439930 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
PCBP2-204ENST00000439930 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
PCBP2-204ENST00000439930 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
PCBP2-204ENST00000439930 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.643e-7■■■■■ 27.2
PCBP2-204ENST00000439930 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
PCBP2-204ENST00000439930 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
PCBP2-204ENST00000439930 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
PCBP2-204ENST00000439930 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
PCBP2-204ENST00000439930 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
PCBP2-204ENST00000439930 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
PCBP2-204ENST00000439930 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
PCBP2-204ENST00000439930 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
PCBP2-204ENST00000439930 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
PCBP2-204ENST00000439930 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
PCBP2-204ENST00000439930 FBLN2P98095 1184 aa18.83■□□□□ 0.6
PCBP2-204ENST00000439930 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
PCBP2-204ENST00000439930 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
PCBP2-204ENST00000439930 CHD1O14646 1710 aa18.82■□□□□ 0.6
PCBP2-204ENST00000439930 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
PCBP2-204ENST00000439930 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
PCBP2-204ENST00000439930 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
PCBP2-204ENST00000439930 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
PCBP2-204ENST00000439930 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
PCBP2-204ENST00000439930 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
PCBP2-204ENST00000439930 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
PCBP2-204ENST00000439930 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
PCBP2-204ENST00000439930 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
PCBP2-204ENST00000439930 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
PCBP2-204ENST00000439930 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
PCBP2-204ENST00000439930 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
PCBP2-204ENST00000439930 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
PCBP2-204ENST00000439930 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
PCBP2-204ENST00000439930 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
PCBP2-204ENST00000439930 IGF1RP08069 1367 aa18.54■□□□□ 0.56
PCBP2-204ENST00000439930 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
PCBP2-204ENST00000439930 CUL7Q14999 1698 aa18.5■□□□□ 0.55
PCBP2-204ENST00000439930 NUP160Q12769 1436 aa18.5■□□□□ 0.55
PCBP2-204ENST00000439930 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
PCBP2-204ENST00000439930 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PCBP2-204ENST00000439930 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms