Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L13-201ENST00000554103 1267 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L15-201ENST00000611059 1267 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L23-201ENST00000615195 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L24-201ENST00000617576 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L22-201ENST00000618238 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L20-201ENST00000619712 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L21-201ENST00000622058 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L10-201ENST00000622460 1267 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 DUX4L25-201ENST00000624915 1269 ntBASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HCFC2Q9Y5Z7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.07■■■□□ 2.08
HCFC2Q9Y5Z7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
HCFC2Q9Y5Z7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.06■■■□□ 2.08
HCFC2Q9Y5Z7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HCFC2Q9Y5Z7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HCFC2Q9Y5Z7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.05■■■□□ 2.08
HCFC2Q9Y5Z7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.05■■■□□ 2.08
HCFC2Q9Y5Z7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
HCFC2Q9Y5Z7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
HCFC2Q9Y5Z7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
HCFC2Q9Y5Z7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.04■■■□□ 2.08
HCFC2Q9Y5Z7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.04■■■□□ 2.08
HCFC2Q9Y5Z7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HCFC2Q9Y5Z7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
HCFC2Q9Y5Z7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.02■■■□□ 2.08
HCFC2Q9Y5Z7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.01■■■□□ 2.08
HCFC2Q9Y5Z7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
HCFC2Q9Y5Z7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HCFC2Q9Y5Z7 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.01■■■□□ 2.07
HCFC2Q9Y5Z7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.01■■■□□ 2.07
HCFC2Q9Y5Z7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28■■■□□ 2.07
HCFC2Q9Y5Z7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
HCFC2Q9Y5Z7 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.96■■■□□ 2.07
HCFC2Q9Y5Z7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
HCFC2Q9Y5Z7 AC120057.4-201ENST00000624722 1615 ntBASIC27.96■■■□□ 2.07
HCFC2Q9Y5Z7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
HCFC2Q9Y5Z7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
HCFC2Q9Y5Z7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
HCFC2Q9Y5Z7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
HCFC2Q9Y5Z7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
HCFC2Q9Y5Z7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
HCFC2Q9Y5Z7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
HCFC2Q9Y5Z7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
HCFC2Q9Y5Z7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
HCFC2Q9Y5Z7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.92■■■□□ 2.06
HCFC2Q9Y5Z7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.91■■■□□ 2.06
HCFC2Q9Y5Z7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
HCFC2Q9Y5Z7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
HCFC2Q9Y5Z7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
HCFC2Q9Y5Z7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.89■■■□□ 2.06
HCFC2Q9Y5Z7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
HCFC2Q9Y5Z7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
HCFC2Q9Y5Z7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.87■■■□□ 2.05
HCFC2Q9Y5Z7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.87■■■□□ 2.05
HCFC2Q9Y5Z7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.86■■■□□ 2.05
HCFC2Q9Y5Z7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.85■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
HCFC2Q9Y5Z7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
HCFC2Q9Y5Z7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.83■■■□□ 2.05
HCFC2Q9Y5Z7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
HCFC2Q9Y5Z7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
HCFC2Q9Y5Z7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
HCFC2Q9Y5Z7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.81■■■□□ 2.04
HCFC2Q9Y5Z7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.81■■■□□ 2.04
HCFC2Q9Y5Z7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
HCFC2Q9Y5Z7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
HCFC2Q9Y5Z7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.79■■■□□ 2.04
HCFC2Q9Y5Z7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
HCFC2Q9Y5Z7 RARRES2P2-201ENST00000394842 485 ntBASIC27.78■■■□□ 2.04
HCFC2Q9Y5Z7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
HCFC2Q9Y5Z7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
HCFC2Q9Y5Z7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
HCFC2Q9Y5Z7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.75■■■□□ 2.03
HCFC2Q9Y5Z7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
HCFC2Q9Y5Z7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
HCFC2Q9Y5Z7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
HCFC2Q9Y5Z7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
HCFC2Q9Y5Z7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
HCFC2Q9Y5Z7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.72■■■□□ 2.03
HCFC2Q9Y5Z7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
HCFC2Q9Y5Z7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms