Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 ZNRF2P2-203ENST00000454624 420 ntBASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HRH3Q9Y5N1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.18■■□□□ 1.46
HRH3Q9Y5N1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.17■■□□□ 1.46
HRH3Q9Y5N1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HRH3Q9Y5N1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HRH3Q9Y5N1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.16■■□□□ 1.46
HRH3Q9Y5N1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.16■■□□□ 1.46
HRH3Q9Y5N1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HRH3Q9Y5N1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
HRH3Q9Y5N1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HRH3Q9Y5N1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HRH3Q9Y5N1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HRH3Q9Y5N1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
HRH3Q9Y5N1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HRH3Q9Y5N1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
HRH3Q9Y5N1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.12■■□□□ 1.45
HRH3Q9Y5N1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HRH3Q9Y5N1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HRH3Q9Y5N1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.1■■□□□ 1.45
HRH3Q9Y5N1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.1■■□□□ 1.45
HRH3Q9Y5N1 MIR6090-201ENST00000622481 60 ntBASIC24.09■■□□□ 1.45
HRH3Q9Y5N1 AL135925.1-201ENST00000605920 1701 ntBASIC24.08■■□□□ 1.45
HRH3Q9Y5N1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HRH3Q9Y5N1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HRH3Q9Y5N1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.08■■□□□ 1.45
HRH3Q9Y5N1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HRH3Q9Y5N1 AC010864.1-201ENST00000609407 1511 ntBASIC24.06■■□□□ 1.44
HRH3Q9Y5N1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
HRH3Q9Y5N1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HRH3Q9Y5N1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.06■■□□□ 1.44
HRH3Q9Y5N1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HRH3Q9Y5N1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.05■■□□□ 1.44
HRH3Q9Y5N1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
HRH3Q9Y5N1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HRH3Q9Y5N1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.05■■□□□ 1.44
HRH3Q9Y5N1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HRH3Q9Y5N1 DUX4L29-201ENST00000425409 679 ntBASIC24.04■■□□□ 1.44
HRH3Q9Y5N1 HLA-V-202ENST00000446817 847 ntBASIC24.04■■□□□ 1.44
HRH3Q9Y5N1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HRH3Q9Y5N1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HRH3Q9Y5N1 AC021231.2-201ENST00000594613 730 ntBASIC24.02■■□□□ 1.44
HRH3Q9Y5N1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
HRH3Q9Y5N1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HRH3Q9Y5N1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.01■■□□□ 1.43
HRH3Q9Y5N1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HRH3Q9Y5N1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
HRH3Q9Y5N1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24■■□□□ 1.43
HRH3Q9Y5N1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24■■□□□ 1.43
HRH3Q9Y5N1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HRH3Q9Y5N1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24■■□□□ 1.43
HRH3Q9Y5N1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HRH3Q9Y5N1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HRH3Q9Y5N1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HRH3Q9Y5N1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.99■■□□□ 1.43
HRH3Q9Y5N1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.99■■□□□ 1.43
HRH3Q9Y5N1 AC139426.1-201ENST00000568218 2529 ntBASIC23.99■■□□□ 1.43
HRH3Q9Y5N1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.98■■□□□ 1.43
HRH3Q9Y5N1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HRH3Q9Y5N1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
HRH3Q9Y5N1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
HRH3Q9Y5N1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.96■■□□□ 1.43
HRH3Q9Y5N1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HRH3Q9Y5N1 ABCB10P1-201ENST00000614297 2181 ntBASIC23.96■■□□□ 1.43
HRH3Q9Y5N1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
HRH3Q9Y5N1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
HRH3Q9Y5N1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HRH3Q9Y5N1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
HRH3Q9Y5N1 AC108673.1-201ENST00000510422 1159 ntBASIC23.94■■□□□ 1.42
HRH3Q9Y5N1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HRH3Q9Y5N1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
HRH3Q9Y5N1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
HRH3Q9Y5N1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.92■■□□□ 1.42
HRH3Q9Y5N1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
HRH3Q9Y5N1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.91■■□□□ 1.42
HRH3Q9Y5N1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HRH3Q9Y5N1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.9■■□□□ 1.42
HRH3Q9Y5N1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HRH3Q9Y5N1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HRH3Q9Y5N1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms