Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA2Q9Y5H1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA2Q9Y5H1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.87■■□□□ 1.89
PCDHGA2Q9Y5H1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA2Q9Y5H1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA2Q9Y5H1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
PCDHGA2Q9Y5H1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA2Q9Y5H1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA2Q9Y5H1 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDHGA2Q9Y5H1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA2Q9Y5H1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHGA2Q9Y5H1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGA2Q9Y5H1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.83■■□□□ 1.89
PCDHGA2Q9Y5H1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.83■■□□□ 1.89
PCDHGA2Q9Y5H1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGA2Q9Y5H1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA2Q9Y5H1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PCDHGA2Q9Y5H1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGA2Q9Y5H1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDHGA2Q9Y5H1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.79■■□□□ 1.88
PCDHGA2Q9Y5H1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHGA2Q9Y5H1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGA2Q9Y5H1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.78■■□□□ 1.88
PCDHGA2Q9Y5H1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGA2Q9Y5H1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDHGA2Q9Y5H1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
PCDHGA2Q9Y5H1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGA2Q9Y5H1 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHGA2Q9Y5H1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGA2Q9Y5H1 RNF126P1-201ENST00000567452 1320 ntBASIC26.71■■□□□ 1.87
PCDHGA2Q9Y5H1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHGA2Q9Y5H1 GPX1-201ENST00000419349 1106 ntBASIC26.71■■□□□ 1.87
PCDHGA2Q9Y5H1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGA2Q9Y5H1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA2Q9Y5H1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA2Q9Y5H1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA2Q9Y5H1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGA2Q9Y5H1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA2Q9Y5H1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
PCDHGA2Q9Y5H1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA2Q9Y5H1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHGA2Q9Y5H1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHGA2Q9Y5H1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHGA2Q9Y5H1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA2Q9Y5H1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHGA2Q9Y5H1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGA2Q9Y5H1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHGA2Q9Y5H1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGA2Q9Y5H1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHGA2Q9Y5H1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA2Q9Y5H1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA2Q9Y5H1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PCDHGA2Q9Y5H1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA2Q9Y5H1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGA2Q9Y5H1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.59■■□□□ 1.85
PCDHGA2Q9Y5H1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGA2Q9Y5H1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGA2Q9Y5H1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDHGA2Q9Y5H1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHGA2Q9Y5H1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.58■■□□□ 1.84
PCDHGA2Q9Y5H1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGA2Q9Y5H1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHGA2Q9Y5H1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
PCDHGA2Q9Y5H1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 AC012354.3-201ENST00000623734 483 ntBASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA2Q9Y5H1 NTF6A-201ENST00000591175 560 ntBASIC26.55■■□□□ 1.84
PCDHGA2Q9Y5H1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA2Q9Y5H1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA2Q9Y5H1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
PCDHGA2Q9Y5H1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.53■■□□□ 1.84
PCDHGA2Q9Y5H1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA2Q9Y5H1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
PCDHGA2Q9Y5H1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHGA2Q9Y5H1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHGA2Q9Y5H1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms