Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRRAPQ9Y4A5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.53■□□□□ 0.88
TRRAPQ9Y4A5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRRAPQ9Y4A5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.52■□□□□ 0.88
TRRAPQ9Y4A5 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.52■□□□□ 0.87
TRRAPQ9Y4A5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.52■□□□□ 0.87
TRRAPQ9Y4A5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRRAPQ9Y4A5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.51■□□□□ 0.87
TRRAPQ9Y4A5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRRAPQ9Y4A5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
TRRAPQ9Y4A5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRRAPQ9Y4A5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRRAPQ9Y4A5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRRAPQ9Y4A5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRRAPQ9Y4A5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.47■□□□□ 0.87
TRRAPQ9Y4A5 GPX1-201ENST00000419349 1106 ntBASIC20.46■□□□□ 0.87
TRRAPQ9Y4A5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.46■□□□□ 0.87
TRRAPQ9Y4A5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRRAPQ9Y4A5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRRAPQ9Y4A5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRRAPQ9Y4A5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRRAPQ9Y4A5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRRAPQ9Y4A5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRRAPQ9Y4A5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.42■□□□□ 0.86
TRRAPQ9Y4A5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRRAPQ9Y4A5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRRAPQ9Y4A5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRRAPQ9Y4A5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRRAPQ9Y4A5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRRAPQ9Y4A5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRRAPQ9Y4A5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRRAPQ9Y4A5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 NTF6A-201ENST00000591175 560 ntBASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRRAPQ9Y4A5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRRAPQ9Y4A5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRRAPQ9Y4A5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRRAPQ9Y4A5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRRAPQ9Y4A5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRRAPQ9Y4A5 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.36■□□□□ 0.85
TRRAPQ9Y4A5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.36■□□□□ 0.85
TRRAPQ9Y4A5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.36■□□□□ 0.85
TRRAPQ9Y4A5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRRAPQ9Y4A5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRRAPQ9Y4A5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRRAPQ9Y4A5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.34■□□□□ 0.85
TRRAPQ9Y4A5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.34■□□□□ 0.85
TRRAPQ9Y4A5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRRAPQ9Y4A5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRRAPQ9Y4A5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
TRRAPQ9Y4A5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRRAPQ9Y4A5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.33■□□□□ 0.84
TRRAPQ9Y4A5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.33■□□□□ 0.84
TRRAPQ9Y4A5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
TRRAPQ9Y4A5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRRAPQ9Y4A5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.31■□□□□ 0.84
TRRAPQ9Y4A5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRRAPQ9Y4A5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.3■□□□□ 0.84
TRRAPQ9Y4A5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.3■□□□□ 0.84
TRRAPQ9Y4A5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.29■□□□□ 0.84
TRRAPQ9Y4A5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRRAPQ9Y4A5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRRAPQ9Y4A5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRRAPQ9Y4A5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.27■□□□□ 0.84
TRRAPQ9Y4A5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRRAPQ9Y4A5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRRAPQ9Y4A5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRRAPQ9Y4A5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRRAPQ9Y4A5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRRAPQ9Y4A5 AL033527.3-201ENST00000566366 1196 ntBASIC20.26■□□□□ 0.83
TRRAPQ9Y4A5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRRAPQ9Y4A5 AC018358.1-201ENST00000631079 1402 ntBASIC20.24■□□□□ 0.83
TRRAPQ9Y4A5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRRAPQ9Y4A5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRRAPQ9Y4A5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms