Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
FNDC3AQ9Y2H6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
FNDC3AQ9Y2H6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FNDC3AQ9Y2H6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.71■■□□□ 1.87
FNDC3AQ9Y2H6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FNDC3AQ9Y2H6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FNDC3AQ9Y2H6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FNDC3AQ9Y2H6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
FNDC3AQ9Y2H6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.7■■□□□ 1.86
FNDC3AQ9Y2H6 DUX4L29-201ENST00000425409 679 ntBASIC26.7■■□□□ 1.86
FNDC3AQ9Y2H6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FNDC3AQ9Y2H6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
FNDC3AQ9Y2H6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
FNDC3AQ9Y2H6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
FNDC3AQ9Y2H6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.66■■□□□ 1.86
FNDC3AQ9Y2H6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.66■■□□□ 1.86
FNDC3AQ9Y2H6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.66■■□□□ 1.86
FNDC3AQ9Y2H6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
FNDC3AQ9Y2H6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
FNDC3AQ9Y2H6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FNDC3AQ9Y2H6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FNDC3AQ9Y2H6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
FNDC3AQ9Y2H6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FNDC3AQ9Y2H6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FNDC3AQ9Y2H6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.64■■□□□ 1.85
FNDC3AQ9Y2H6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
FNDC3AQ9Y2H6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.64■■□□□ 1.85
FNDC3AQ9Y2H6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FNDC3AQ9Y2H6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
FNDC3AQ9Y2H6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
FNDC3AQ9Y2H6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.62■■□□□ 1.85
FNDC3AQ9Y2H6 AC021231.2-201ENST00000594613 730 ntBASIC26.62■■□□□ 1.85
FNDC3AQ9Y2H6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3AQ9Y2H6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FNDC3AQ9Y2H6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FNDC3AQ9Y2H6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FNDC3AQ9Y2H6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FNDC3AQ9Y2H6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3AQ9Y2H6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3AQ9Y2H6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3AQ9Y2H6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
FNDC3AQ9Y2H6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.56■■□□□ 1.84
FNDC3AQ9Y2H6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.55■■□□□ 1.84
FNDC3AQ9Y2H6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.54■■□□□ 1.84
FNDC3AQ9Y2H6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FNDC3AQ9Y2H6 MIR4449-201ENST00000578365 66 ntBASIC26.54■■□□□ 1.84
FNDC3AQ9Y2H6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.54■■□□□ 1.84
FNDC3AQ9Y2H6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.53■■□□□ 1.84
FNDC3AQ9Y2H6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.53■■□□□ 1.84
FNDC3AQ9Y2H6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
FNDC3AQ9Y2H6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
FNDC3AQ9Y2H6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FNDC3AQ9Y2H6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
FNDC3AQ9Y2H6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
FNDC3AQ9Y2H6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
FNDC3AQ9Y2H6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.51■■□□□ 1.83
FNDC3AQ9Y2H6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FNDC3AQ9Y2H6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FNDC3AQ9Y2H6 MIR639-201ENST00000384974 98 ntBASIC26.5■■□□□ 1.83
FNDC3AQ9Y2H6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FNDC3AQ9Y2H6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 MIR6090-201ENST00000622481 60 ntBASIC26.49■■□□□ 1.83
FNDC3AQ9Y2H6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FNDC3AQ9Y2H6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
FNDC3AQ9Y2H6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FNDC3AQ9Y2H6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
FNDC3AQ9Y2H6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.47■■□□□ 1.83
FNDC3AQ9Y2H6 AC108673.1-201ENST00000510422 1159 ntBASIC26.46■■□□□ 1.83
FNDC3AQ9Y2H6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.46■■□□□ 1.83
FNDC3AQ9Y2H6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.45■■□□□ 1.82
FNDC3AQ9Y2H6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.45■■□□□ 1.82
FNDC3AQ9Y2H6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
FNDC3AQ9Y2H6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
FNDC3AQ9Y2H6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.43■■□□□ 1.82
FNDC3AQ9Y2H6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FNDC3AQ9Y2H6 AL135925.1-201ENST00000605920 1701 ntBASIC26.42■■□□□ 1.82
FNDC3AQ9Y2H6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
FNDC3AQ9Y2H6 MIR3648-2-201ENST00000581792 180 ntBASIC26.41■■□□□ 1.82
FNDC3AQ9Y2H6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FNDC3AQ9Y2H6 AC016575.1-201ENST00000607026 382 ntBASIC26.41■■□□□ 1.82
FNDC3AQ9Y2H6 MIR3648-1-201ENST00000615959 180 ntBASIC26.41■■□□□ 1.82
FNDC3AQ9Y2H6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FNDC3AQ9Y2H6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
FNDC3AQ9Y2H6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
FNDC3AQ9Y2H6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.39■■□□□ 1.82
FNDC3AQ9Y2H6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.39■■□□□ 1.82
FNDC3AQ9Y2H6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.39■■□□□ 1.82
FNDC3AQ9Y2H6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
FNDC3AQ9Y2H6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms