Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SMR3AQ99954 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMR3AQ99954 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.13■■□□□ 1.13
SMR3AQ99954 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.13■■□□□ 1.13
SMR3AQ99954 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.13■■□□□ 1.13
SMR3AQ99954 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMR3AQ99954 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.1■■□□□ 1.13
SMR3AQ99954 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SMR3AQ99954 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMR3AQ99954 RNF126P1-201ENST00000567452 1320 ntBASIC22.08■■□□□ 1.13
SMR3AQ99954 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.08■■□□□ 1.13
SMR3AQ99954 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 AC012354.3-201ENST00000623734 483 ntBASIC22.06■■□□□ 1.12
SMR3AQ99954 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMR3AQ99954 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.05■■□□□ 1.12
SMR3AQ99954 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.05■■□□□ 1.12
SMR3AQ99954 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.04■■□□□ 1.12
SMR3AQ99954 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SMR3AQ99954 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SMR3AQ99954 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SMR3AQ99954 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMR3AQ99954 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.02■■□□□ 1.12
SMR3AQ99954 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SMR3AQ99954 NTF6A-201ENST00000591175 560 ntBASIC22.02■■□□□ 1.12
SMR3AQ99954 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMR3AQ99954 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SMR3AQ99954 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22■■□□□ 1.11
SMR3AQ99954 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.99■■□□□ 1.11
SMR3AQ99954 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SMR3AQ99954 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.98■■□□□ 1.11
SMR3AQ99954 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMR3AQ99954 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.97■■□□□ 1.11
SMR3AQ99954 AL033527.3-201ENST00000566366 1196 ntBASIC21.97■■□□□ 1.11
SMR3AQ99954 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.97■■□□□ 1.11
SMR3AQ99954 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
SMR3AQ99954 AC008813.1-201ENST00000536597 885 ntBASIC21.95■■□□□ 1.1
SMR3AQ99954 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.94■■□□□ 1.1
SMR3AQ99954 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SMR3AQ99954 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMR3AQ99954 AC018358.1-201ENST00000631079 1402 ntBASIC21.93■■□□□ 1.1
SMR3AQ99954 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.92■■□□□ 1.1
SMR3AQ99954 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMR3AQ99954 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMR3AQ99954 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
SMR3AQ99954 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.92■■□□□ 1.1
SMR3AQ99954 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMR3AQ99954 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SMR3AQ99954 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.89■■□□□ 1.1
SMR3AQ99954 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMR3AQ99954 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SMR3AQ99954 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMR3AQ99954 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 AC022413.1-201ENST00000624602 984 ntBASIC21.88■■□□□ 1.09
SMR3AQ99954 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.88■■□□□ 1.09
SMR3AQ99954 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMR3AQ99954 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.85■■□□□ 1.09
SMR3AQ99954 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.83■■□□□ 1.09
SMR3AQ99954 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMR3AQ99954 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SMR3AQ99954 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SMR3AQ99954 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMR3AQ99954 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.8■■□□□ 1.08
SMR3AQ99954 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.78■■□□□ 1.08
SMR3AQ99954 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMR3AQ99954 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMR3AQ99954 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.77■■□□□ 1.08
SMR3AQ99954 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMR3AQ99954 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMR3AQ99954 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMR3AQ99954 U85056.1-201ENST00000616429 682 ntBASIC21.75■■□□□ 1.07
SMR3AQ99954 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.74■■□□□ 1.07
SMR3AQ99954 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMR3AQ99954 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMR3AQ99954 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.73■■□□□ 1.07
SMR3AQ99954 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMR3AQ99954 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.73■■□□□ 1.07
SMR3AQ99954 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.73■■□□□ 1.07
SMR3AQ99954 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms