Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SLC6A7Q99884 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A7Q99884 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC6A7Q99884 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC6A7Q99884 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A7Q99884 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A7Q99884 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A7Q99884 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A7Q99884 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A7Q99884 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A7Q99884 AP006261.1-201ENST00000584783 668 ntBASIC22.6■■□□□ 1.21
SLC6A7Q99884 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A7Q99884 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A7Q99884 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A7Q99884 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SLC6A7Q99884 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A7Q99884 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC6A7Q99884 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A7Q99884 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A7Q99884 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A7Q99884 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A7Q99884 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A7Q99884 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SLC6A7Q99884 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SLC6A7Q99884 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A7Q99884 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC6A7Q99884 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A7Q99884 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SLC6A7Q99884 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.54■■□□□ 1.2
SLC6A7Q99884 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.53■■□□□ 1.2
SLC6A7Q99884 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A7Q99884 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SLC6A7Q99884 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A7Q99884 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A7Q99884 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A7Q99884 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A7Q99884 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SLC6A7Q99884 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SLC6A7Q99884 AC142086.6-201ENST00000621154 1765 ntBASIC22.51■■□□□ 1.19
SLC6A7Q99884 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.51■■□□□ 1.19
SLC6A7Q99884 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.51■■□□□ 1.19
SLC6A7Q99884 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A7Q99884 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A7Q99884 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A7Q99884 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.5■■□□□ 1.19
SLC6A7Q99884 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A7Q99884 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A7Q99884 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A7Q99884 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.5■■□□□ 1.19
SLC6A7Q99884 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC6A7Q99884 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC6A7Q99884 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC6A7Q99884 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC6A7Q99884 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A7Q99884 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A7Q99884 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A7Q99884 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A7Q99884 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SLC6A7Q99884 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SLC6A7Q99884 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A7Q99884 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A7Q99884 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A7Q99884 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SLC6A7Q99884 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A7Q99884 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.46■■□□□ 1.19
SLC6A7Q99884 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SLC6A7Q99884 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.45■■□□□ 1.18
SLC6A7Q99884 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A7Q99884 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A7Q99884 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SLC6A7Q99884 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
SLC6A7Q99884 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
SLC6A7Q99884 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A7Q99884 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A7Q99884 AL135925.1-201ENST00000605920 1701 ntBASIC22.42■■□□□ 1.18
SLC6A7Q99884 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SLC6A7Q99884 MIR3665-201ENST00000578708 105 ntBASIC22.41■■□□□ 1.18
SLC6A7Q99884 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A7Q99884 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC6A7Q99884 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A7Q99884 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A7Q99884 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
SLC6A7Q99884 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A7Q99884 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC6A7Q99884 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A7Q99884 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A7Q99884 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A7Q99884 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A7Q99884 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A7Q99884 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A7Q99884 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC6A7Q99884 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SLC6A7Q99884 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A7Q99884 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A7Q99884 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms