Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SH3TC2Q8TF17 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.41■■■□□ 2.46
SH3TC2Q8TF17 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 GPX1-201ENST00000419349 1106 ntBASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SH3TC2Q8TF17 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
SH3TC2Q8TF17 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.34■■■□□ 2.45
SH3TC2Q8TF17 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SH3TC2Q8TF17 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SH3TC2Q8TF17 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.31■■■□□ 2.44
SH3TC2Q8TF17 RNF126P1-201ENST00000567452 1320 ntBASIC30.3■■■□□ 2.44
SH3TC2Q8TF17 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.3■■■□□ 2.44
SH3TC2Q8TF17 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH3TC2Q8TF17 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SH3TC2Q8TF17 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SH3TC2Q8TF17 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
SH3TC2Q8TF17 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SH3TC2Q8TF17 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SH3TC2Q8TF17 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SH3TC2Q8TF17 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
SH3TC2Q8TF17 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.21■■■□□ 2.43
SH3TC2Q8TF17 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.2■■■□□ 2.43
SH3TC2Q8TF17 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.2■■■□□ 2.43
SH3TC2Q8TF17 AC012354.3-201ENST00000623734 483 ntBASIC30.19■■■□□ 2.42
SH3TC2Q8TF17 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SH3TC2Q8TF17 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SH3TC2Q8TF17 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 NTF6A-201ENST00000591175 560 ntBASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.14■■■□□ 2.41
SH3TC2Q8TF17 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SH3TC2Q8TF17 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SH3TC2Q8TF17 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
SH3TC2Q8TF17 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.07■■■□□ 2.4
SH3TC2Q8TF17 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SH3TC2Q8TF17 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SH3TC2Q8TF17 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SH3TC2Q8TF17 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH3TC2Q8TF17 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SH3TC2Q8TF17 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AL033527.3-201ENST00000566366 1196 ntBASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AC022413.1-201ENST00000624602 984 ntBASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AC008813.1-201ENST00000536597 885 ntBASIC30■■■□□ 2.39
SH3TC2Q8TF17 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30■■■□□ 2.39
SH3TC2Q8TF17 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.99■■■□□ 2.39
SH3TC2Q8TF17 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SH3TC2Q8TF17 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.98■■■□□ 2.39
SH3TC2Q8TF17 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.98■■■□□ 2.39
SH3TC2Q8TF17 AC018358.1-201ENST00000631079 1402 ntBASIC29.97■■■□□ 2.39
SH3TC2Q8TF17 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SH3TC2Q8TF17 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
SH3TC2Q8TF17 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SH3TC2Q8TF17 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms