Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.7■■□□□ 1.71
EFCAB3Q8N7B9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
EFCAB3Q8N7B9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
EFCAB3Q8N7B9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
EFCAB3Q8N7B9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
EFCAB3Q8N7B9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
EFCAB3Q8N7B9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
EFCAB3Q8N7B9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
EFCAB3Q8N7B9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.68■■□□□ 1.7
EFCAB3Q8N7B9 AL391121.1-201ENST00000607967 1349 ntBASIC25.67■■□□□ 1.7
EFCAB3Q8N7B9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
EFCAB3Q8N7B9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
EFCAB3Q8N7B9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
EFCAB3Q8N7B9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EFCAB3Q8N7B9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.66■■□□□ 1.7
EFCAB3Q8N7B9 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.65■■□□□ 1.7
EFCAB3Q8N7B9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
EFCAB3Q8N7B9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
EFCAB3Q8N7B9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EFCAB3Q8N7B9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
EFCAB3Q8N7B9 MIR7108-201ENST00000614319 87 ntBASIC25.64■■□□□ 1.7
EFCAB3Q8N7B9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
EFCAB3Q8N7B9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
EFCAB3Q8N7B9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.63■■□□□ 1.69
EFCAB3Q8N7B9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.63■■□□□ 1.69
EFCAB3Q8N7B9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
EFCAB3Q8N7B9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
EFCAB3Q8N7B9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
EFCAB3Q8N7B9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.61■■□□□ 1.69
EFCAB3Q8N7B9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
EFCAB3Q8N7B9 WASH5P-204ENST00000632292 975 ntBASIC25.61■■□□□ 1.69
EFCAB3Q8N7B9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
EFCAB3Q8N7B9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
EFCAB3Q8N7B9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
EFCAB3Q8N7B9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.6■■□□□ 1.69
EFCAB3Q8N7B9 MIR3665-201ENST00000578708 105 ntBASIC25.59■■□□□ 1.69
EFCAB3Q8N7B9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
EFCAB3Q8N7B9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
EFCAB3Q8N7B9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.58■■□□□ 1.69
EFCAB3Q8N7B9 ABHD17AP4-201ENST00000411545 909 ntBASIC25.58■■□□□ 1.69
EFCAB3Q8N7B9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
EFCAB3Q8N7B9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
EFCAB3Q8N7B9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
EFCAB3Q8N7B9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
EFCAB3Q8N7B9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EFCAB3Q8N7B9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
EFCAB3Q8N7B9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EFCAB3Q8N7B9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EFCAB3Q8N7B9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EFCAB3Q8N7B9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EFCAB3Q8N7B9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EFCAB3Q8N7B9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EFCAB3Q8N7B9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EFCAB3Q8N7B9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
EFCAB3Q8N7B9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
EFCAB3Q8N7B9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
EFCAB3Q8N7B9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
EFCAB3Q8N7B9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.53■■□□□ 1.68
EFCAB3Q8N7B9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
EFCAB3Q8N7B9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
EFCAB3Q8N7B9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.51■■□□□ 1.67
EFCAB3Q8N7B9 AC142086.6-201ENST00000621154 1765 ntBASIC25.51■■□□□ 1.67
EFCAB3Q8N7B9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.51■■□□□ 1.67
EFCAB3Q8N7B9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCAB3Q8N7B9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCAB3Q8N7B9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
EFCAB3Q8N7B9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
EFCAB3Q8N7B9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
EFCAB3Q8N7B9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
EFCAB3Q8N7B9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
EFCAB3Q8N7B9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCAB3Q8N7B9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
EFCAB3Q8N7B9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.47■■□□□ 1.67
EFCAB3Q8N7B9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.47■■□□□ 1.67
EFCAB3Q8N7B9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
EFCAB3Q8N7B9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.45■■□□□ 1.66
EFCAB3Q8N7B9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.45■■□□□ 1.66
EFCAB3Q8N7B9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
EFCAB3Q8N7B9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.45■■□□□ 1.66
EFCAB3Q8N7B9 HLA-V-202ENST00000446817 847 ntBASIC25.44■■□□□ 1.66
EFCAB3Q8N7B9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
EFCAB3Q8N7B9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
EFCAB3Q8N7B9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.43■■□□□ 1.66
EFCAB3Q8N7B9 AL135925.1-201ENST00000605920 1701 ntBASIC25.43■■□□□ 1.66
EFCAB3Q8N7B9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
EFCAB3Q8N7B9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
EFCAB3Q8N7B9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms