Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCRAQ6ISU1 RNF126P1-201ENST00000567452 1320 ntBASIC28■■■□□ 2.07
PTCRAQ6ISU1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28■■■□□ 2.07
PTCRAQ6ISU1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.99■■■□□ 2.07
PTCRAQ6ISU1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PTCRAQ6ISU1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PTCRAQ6ISU1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PTCRAQ6ISU1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCRAQ6ISU1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PTCRAQ6ISU1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PTCRAQ6ISU1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
PTCRAQ6ISU1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.96■■■□□ 2.07
PTCRAQ6ISU1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PTCRAQ6ISU1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
PTCRAQ6ISU1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
PTCRAQ6ISU1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.94■■■□□ 2.06
PTCRAQ6ISU1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.94■■■□□ 2.06
PTCRAQ6ISU1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PTCRAQ6ISU1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
PTCRAQ6ISU1 AC012354.3-201ENST00000623734 483 ntBASIC27.91■■■□□ 2.06
PTCRAQ6ISU1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
PTCRAQ6ISU1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PTCRAQ6ISU1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PTCRAQ6ISU1 NTF6A-201ENST00000591175 560 ntBASIC27.88■■■□□ 2.05
PTCRAQ6ISU1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PTCRAQ6ISU1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.88■■■□□ 2.05
PTCRAQ6ISU1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
PTCRAQ6ISU1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PTCRAQ6ISU1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PTCRAQ6ISU1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.87■■■□□ 2.05
PTCRAQ6ISU1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PTCRAQ6ISU1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCRAQ6ISU1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCRAQ6ISU1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCRAQ6ISU1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.83■■■□□ 2.05
PTCRAQ6ISU1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.83■■■□□ 2.05
PTCRAQ6ISU1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PTCRAQ6ISU1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.82■■■□□ 2.04
PTCRAQ6ISU1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PTCRAQ6ISU1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
PTCRAQ6ISU1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
PTCRAQ6ISU1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.8■■■□□ 2.04
PTCRAQ6ISU1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.79■■■□□ 2.04
PTCRAQ6ISU1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
PTCRAQ6ISU1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
PTCRAQ6ISU1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
PTCRAQ6ISU1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
PTCRAQ6ISU1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.78■■■□□ 2.04
PTCRAQ6ISU1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PTCRAQ6ISU1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PTCRAQ6ISU1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PTCRAQ6ISU1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PTCRAQ6ISU1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PTCRAQ6ISU1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.75■■■□□ 2.03
PTCRAQ6ISU1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.74■■■□□ 2.03
PTCRAQ6ISU1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.73■■■□□ 2.03
PTCRAQ6ISU1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCRAQ6ISU1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PTCRAQ6ISU1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.71■■■□□ 2.03
PTCRAQ6ISU1 AC018358.1-201ENST00000631079 1402 ntBASIC27.71■■■□□ 2.03
PTCRAQ6ISU1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PTCRAQ6ISU1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCRAQ6ISU1 AL033527.3-201ENST00000566366 1196 ntBASIC27.69■■■□□ 2.02
PTCRAQ6ISU1 AC022413.1-201ENST00000624602 984 ntBASIC27.69■■■□□ 2.02
PTCRAQ6ISU1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCRAQ6ISU1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
PTCRAQ6ISU1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PTCRAQ6ISU1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PTCRAQ6ISU1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
PTCRAQ6ISU1 AC008813.1-201ENST00000536597 885 ntBASIC27.66■■■□□ 2.02
PTCRAQ6ISU1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PTCRAQ6ISU1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTCRAQ6ISU1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCRAQ6ISU1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PTCRAQ6ISU1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.63■■■□□ 2.01
PTCRAQ6ISU1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PTCRAQ6ISU1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
PTCRAQ6ISU1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.61■■■□□ 2.01
PTCRAQ6ISU1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.6■■■□□ 2.01
PTCRAQ6ISU1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCRAQ6ISU1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCRAQ6ISU1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PTCRAQ6ISU1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCRAQ6ISU1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCRAQ6ISU1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.58■■■□□ 2.01
PTCRAQ6ISU1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.57■■■□□ 2
PTCRAQ6ISU1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PTCRAQ6ISU1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.57■■■□□ 2
PTCRAQ6ISU1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.57■■■□□ 2
PTCRAQ6ISU1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.56■■■□□ 2
PTCRAQ6ISU1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.56■■■□□ 2
PTCRAQ6ISU1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCRAQ6ISU1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCRAQ6ISU1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms