Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
RC3H1Q5TC82 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
RC3H1Q5TC82 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC34.07■■■■□ 3.05
RC3H1Q5TC82 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
RC3H1Q5TC82 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC34.07■■■■□ 3.04
RC3H1Q5TC82 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.07■■■■□ 3.04
RC3H1Q5TC82 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
RC3H1Q5TC82 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.06■■■■□ 3.04
RC3H1Q5TC82 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC34.05■■■■□ 3.04
RC3H1Q5TC82 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RC3H1Q5TC82 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
RC3H1Q5TC82 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.03■■■■□ 3.04
RC3H1Q5TC82 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC34.03■■■■□ 3.04
RC3H1Q5TC82 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.02■■■■□ 3.04
RC3H1Q5TC82 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.01■■■■□ 3.03
RC3H1Q5TC82 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.03
RC3H1Q5TC82 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.99■■■■□ 3.03
RC3H1Q5TC82 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC33.99■■■■□ 3.03
RC3H1Q5TC82 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
RC3H1Q5TC82 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.98■■■■□ 3.03
RC3H1Q5TC82 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
RC3H1Q5TC82 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
RC3H1Q5TC82 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.94■■■■□ 3.02
RC3H1Q5TC82 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
RC3H1Q5TC82 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC33.94■■■■□ 3.02
RC3H1Q5TC82 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.94■■■■□ 3.02
RC3H1Q5TC82 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.94■■■■□ 3.02
RC3H1Q5TC82 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
RC3H1Q5TC82 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33.93■■■■□ 3.02
RC3H1Q5TC82 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
RC3H1Q5TC82 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
RC3H1Q5TC82 SRP68-213ENST00000629930 165 ntTSL 5 BASIC33.92■■■■□ 3.02
RC3H1Q5TC82 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
RC3H1Q5TC82 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC33.9■■■■□ 3.02
RC3H1Q5TC82 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
RC3H1Q5TC82 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.87■■■■□ 3.01
RC3H1Q5TC82 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC33.87■■■■□ 3.01
RC3H1Q5TC82 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC33.87■■■■□ 3.01
RC3H1Q5TC82 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
RC3H1Q5TC82 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC33.86■■■■□ 3.01
RC3H1Q5TC82 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
RC3H1Q5TC82 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.83■■■■□ 3.01
RC3H1Q5TC82 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.81■■■■□ 3
RC3H1Q5TC82 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.81■■■■□ 3
RC3H1Q5TC82 AC120057.4-201ENST00000624722 1615 ntBASIC33.81■■■■□ 3
RC3H1Q5TC82 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
RC3H1Q5TC82 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
RC3H1Q5TC82 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.79■■■■□ 3
RC3H1Q5TC82 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC33.79■■■■□ 3
RC3H1Q5TC82 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.79■■■■□ 3
RC3H1Q5TC82 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.79■■■■□ 3
RC3H1Q5TC82 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
RC3H1Q5TC82 RARRES2P2-201ENST00000394842 485 ntBASIC33.78■■■■□ 3
RC3H1Q5TC82 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC33.78■■■■□ 3
RC3H1Q5TC82 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.76■■■■□ 3
RC3H1Q5TC82 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.76■■■□□ 2.99
RC3H1Q5TC82 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
RC3H1Q5TC82 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.72■■■□□ 2.99
RC3H1Q5TC82 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
RC3H1Q5TC82 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
RC3H1Q5TC82 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
RC3H1Q5TC82 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RC3H1Q5TC82 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.71■■■□□ 2.99
RC3H1Q5TC82 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
RC3H1Q5TC82 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
RC3H1Q5TC82 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.69■■■□□ 2.98
RC3H1Q5TC82 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
RC3H1Q5TC82 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
RC3H1Q5TC82 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 ABHD17AP5-201ENST00000580133 923 ntBASIC33.68■■■□□ 2.98
RC3H1Q5TC82 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC33.68■■■□□ 2.98
RC3H1Q5TC82 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
RC3H1Q5TC82 GPX1-201ENST00000419349 1106 ntBASIC33.67■■■□□ 2.98
RC3H1Q5TC82 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.67■■■□□ 2.98
RC3H1Q5TC82 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
RC3H1Q5TC82 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
RC3H1Q5TC82 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.66■■■□□ 2.98
RC3H1Q5TC82 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.65■■■□□ 2.98
RC3H1Q5TC82 LINC00273-201ENST00000539813 1452 ntBASIC33.65■■■□□ 2.98
RC3H1Q5TC82 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
RC3H1Q5TC82 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.65■■■□□ 2.98
RC3H1Q5TC82 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
RC3H1Q5TC82 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.64■■■□□ 2.98
RC3H1Q5TC82 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
RC3H1Q5TC82 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC33.64■■■□□ 2.98
RC3H1Q5TC82 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
RC3H1Q5TC82 RNF126P1-201ENST00000567452 1320 ntBASIC33.63■■■□□ 2.97
RC3H1Q5TC82 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.63■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms