Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL13A1Q5TAT6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL13A1Q5TAT6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL13A1Q5TAT6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL13A1Q5TAT6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL13A1Q5TAT6 TSPY13P-201ENST00000338964 914 ntBASIC31.28■■■□□ 2.6
COL13A1Q5TAT6 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.27■■■□□ 2.6
COL13A1Q5TAT6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
COL13A1Q5TAT6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL13A1Q5TAT6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.25■■■□□ 2.59
COL13A1Q5TAT6 U85056.1-201ENST00000616429 682 ntBASIC31.24■■■□□ 2.59
COL13A1Q5TAT6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.23■■■□□ 2.59
COL13A1Q5TAT6 WASH5P-204ENST00000632292 975 ntBASIC31.23■■■□□ 2.59
COL13A1Q5TAT6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL13A1Q5TAT6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.22■■■□□ 2.59
COL13A1Q5TAT6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.22■■■□□ 2.59
COL13A1Q5TAT6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.21■■■□□ 2.59
COL13A1Q5TAT6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL13A1Q5TAT6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.21■■■□□ 2.59
COL13A1Q5TAT6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.21■■■□□ 2.59
COL13A1Q5TAT6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.21■■■□□ 2.59
COL13A1Q5TAT6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
COL13A1Q5TAT6 AC004987.1-201ENST00000428627 508 ntBASIC31.18■■■□□ 2.58
COL13A1Q5TAT6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL13A1Q5TAT6 AC131212.1-201ENST00000613771 668 ntBASIC31.17■■■□□ 2.58
COL13A1Q5TAT6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.16■■■□□ 2.58
COL13A1Q5TAT6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL13A1Q5TAT6 AC022413.1-201ENST00000624602 984 ntBASIC31.15■■■□□ 2.58
COL13A1Q5TAT6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL13A1Q5TAT6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
COL13A1Q5TAT6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 ATP5G2P3-201ENST00000429083 425 ntBASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.13■■■□□ 2.57
COL13A1Q5TAT6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL13A1Q5TAT6 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.12■■■□□ 2.57
COL13A1Q5TAT6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
COL13A1Q5TAT6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.11■■■□□ 2.57
COL13A1Q5TAT6 AL451085.2-201ENST00000605085 799 ntBASIC31.09■■■□□ 2.57
COL13A1Q5TAT6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.09■■■□□ 2.57
COL13A1Q5TAT6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
COL13A1Q5TAT6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL13A1Q5TAT6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL13A1Q5TAT6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.05■■■□□ 2.56
COL13A1Q5TAT6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
COL13A1Q5TAT6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.04■■■□□ 2.56
COL13A1Q5TAT6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL13A1Q5TAT6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.04■■■□□ 2.56
COL13A1Q5TAT6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL13A1Q5TAT6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
COL13A1Q5TAT6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL13A1Q5TAT6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.01■■■□□ 2.55
COL13A1Q5TAT6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL13A1Q5TAT6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
COL13A1Q5TAT6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31■■■□□ 2.55
COL13A1Q5TAT6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL13A1Q5TAT6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
COL13A1Q5TAT6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL13A1Q5TAT6 KRT18P60-201ENST00000312876 1297 ntBASIC30.96■■■□□ 2.55
COL13A1Q5TAT6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 THA1P-201ENST00000590384 1145 ntBASIC30.95■■■□□ 2.55
COL13A1Q5TAT6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL13A1Q5TAT6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL13A1Q5TAT6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
COL13A1Q5TAT6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.94■■■□□ 2.54
COL13A1Q5TAT6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.94■■■□□ 2.54
COL13A1Q5TAT6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
COL13A1Q5TAT6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL13A1Q5TAT6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
COL13A1Q5TAT6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.92■■■□□ 2.54
COL13A1Q5TAT6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.9■■■□□ 2.54
COL13A1Q5TAT6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL13A1Q5TAT6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL13A1Q5TAT6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL13A1Q5TAT6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.88■■■□□ 2.53
COL13A1Q5TAT6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.88■■■□□ 2.53
COL13A1Q5TAT6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.86■■■□□ 2.53
COL13A1Q5TAT6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL13A1Q5TAT6 AC025884.2-201ENST00000553429 711 ntBASIC30.86■■■□□ 2.53
COL13A1Q5TAT6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.85■■■□□ 2.53
COL13A1Q5TAT6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL13A1Q5TAT6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL13A1Q5TAT6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
COL13A1Q5TAT6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
COL13A1Q5TAT6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
COL13A1Q5TAT6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
COL13A1Q5TAT6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
COL13A1Q5TAT6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL13A1Q5TAT6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL13A1Q5TAT6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
COL13A1Q5TAT6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
COL13A1Q5TAT6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.79■■■□□ 2.52
COL13A1Q5TAT6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
COL13A1Q5TAT6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms