Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
USH1GQ495M9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
USH1GQ495M9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.45■■■□□ 2.46
USH1GQ495M9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USH1GQ495M9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USH1GQ495M9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.44■■■□□ 2.46
USH1GQ495M9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USH1GQ495M9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
USH1GQ495M9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
USH1GQ495M9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.43■■■□□ 2.46
USH1GQ495M9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
USH1GQ495M9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USH1GQ495M9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.4■■■□□ 2.46
USH1GQ495M9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
USH1GQ495M9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
USH1GQ495M9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
USH1GQ495M9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USH1GQ495M9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USH1GQ495M9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.36■■■□□ 2.45
USH1GQ495M9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
USH1GQ495M9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.36■■■□□ 2.45
USH1GQ495M9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
USH1GQ495M9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USH1GQ495M9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
USH1GQ495M9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.34■■■□□ 2.45
USH1GQ495M9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.33■■■□□ 2.45
USH1GQ495M9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
USH1GQ495M9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
USH1GQ495M9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.33■■■□□ 2.45
USH1GQ495M9 AC010864.1-201ENST00000609407 1511 ntBASIC30.32■■■□□ 2.44
USH1GQ495M9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
USH1GQ495M9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
USH1GQ495M9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
USH1GQ495M9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
USH1GQ495M9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
USH1GQ495M9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USH1GQ495M9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
USH1GQ495M9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USH1GQ495M9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
USH1GQ495M9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USH1GQ495M9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.25■■■□□ 2.43
USH1GQ495M9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USH1GQ495M9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
USH1GQ495M9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
USH1GQ495M9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
USH1GQ495M9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.21■■■□□ 2.43
USH1GQ495M9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.21■■■□□ 2.43
USH1GQ495M9 HLA-V-202ENST00000446817 847 ntBASIC30.2■■■□□ 2.43
USH1GQ495M9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
USH1GQ495M9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USH1GQ495M9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USH1GQ495M9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.19■■■□□ 2.42
USH1GQ495M9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.19■■■□□ 2.42
USH1GQ495M9 AL135925.1-201ENST00000605920 1701 ntBASIC30.18■■■□□ 2.42
USH1GQ495M9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USH1GQ495M9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.15■■■□□ 2.42
USH1GQ495M9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
USH1GQ495M9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
USH1GQ495M9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.13■■■□□ 2.41
USH1GQ495M9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
USH1GQ495M9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.13■■■□□ 2.41
USH1GQ495M9 LINC01971-201ENST00000617888 1048 ntBASIC30.13■■■□□ 2.41
USH1GQ495M9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USH1GQ495M9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.11■■■□□ 2.41
USH1GQ495M9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.11■■■□□ 2.41
USH1GQ495M9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
USH1GQ495M9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USH1GQ495M9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USH1GQ495M9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
USH1GQ495M9 DUX4L11-201ENST00000611504 1267 ntBASIC30.1■■■□□ 2.41
USH1GQ495M9 DUX4L12-201ENST00000614593 1267 ntBASIC30.1■■■□□ 2.41
USH1GQ495M9 DUX4L14-201ENST00000621227 1267 ntBASIC30.1■■■□□ 2.41
USH1GQ495M9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USH1GQ495M9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USH1GQ495M9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
USH1GQ495M9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USH1GQ495M9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.09■■■□□ 2.41
USH1GQ495M9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
USH1GQ495M9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USH1GQ495M9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
USH1GQ495M9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
USH1GQ495M9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USH1GQ495M9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.06■■■□□ 2.4
USH1GQ495M9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.06■■■□□ 2.4
USH1GQ495M9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
USH1GQ495M9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.06■■■□□ 2.4
USH1GQ495M9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
USH1GQ495M9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USH1GQ495M9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USH1GQ495M9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USH1GQ495M9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.05■■■□□ 2.4
USH1GQ495M9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.05■■■□□ 2.4
USH1GQ495M9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.04■■■□□ 2.4
USH1GQ495M9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.03■■■□□ 2.4
USH1GQ495M9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
USH1GQ495M9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.03■■■□□ 2.4
USH1GQ495M9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.02■■■□□ 2.4
USH1GQ495M9 AC127502.1-201ENST00000399971 1502 ntBASIC30.01■■■□□ 2.4
USH1GQ495M9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.01■■■□□ 2.4
USH1GQ495M9 MIR3648-2-201ENST00000581792 180 ntBASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms