Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAB4BP61018 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB4BP61018 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB4BP61018 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB4BP61018 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB4BP61018 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB4BP61018 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAB4BP61018 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB4BP61018 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB4BP61018 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB4BP61018 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB4BP61018 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB4BP61018 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB4BP61018 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB4BP61018 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB4BP61018 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB4BP61018 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB4BP61018 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB4BP61018 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB4BP61018 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB4BP61018 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB4BP61018 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB4BP61018 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB4BP61018 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB4BP61018 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB4BP61018 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB4BP61018 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB4BP61018 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB4BP61018 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB4BP61018 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB4BP61018 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB4BP61018 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB4BP61018 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB4BP61018 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB4BP61018 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB4BP61018 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB4BP61018 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB4BP61018 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAB4BP61018 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB4BP61018 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB4BP61018 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB4BP61018 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB4BP61018 AC142086.6-201ENST00000621154 1765 ntBASIC20.15■□□□□ 0.82
RAB4BP61018 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB4BP61018 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB4BP61018 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB4BP61018 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB4BP61018 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB4BP61018 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB4BP61018 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB4BP61018 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB4BP61018 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB4BP61018 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB4BP61018 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB4BP61018 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB4BP61018 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB4BP61018 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB4BP61018 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB4BP61018 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB4BP61018 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB4BP61018 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB4BP61018 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB4BP61018 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB4BP61018 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB4BP61018 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB4BP61018 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB4BP61018 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB4BP61018 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAB4BP61018 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB4BP61018 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RAB4BP61018 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.08■□□□□ 0.81
RAB4BP61018 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB4BP61018 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB4BP61018 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB4BP61018 ST7-AS1-201ENST00000456775 1889 ntBASIC20.07■□□□□ 0.8
RAB4BP61018 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB4BP61018 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAB4BP61018 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB4BP61018 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB4BP61018 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RAB4BP61018 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB4BP61018 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB4BP61018 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB4BP61018 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB4BP61018 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB4BP61018 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB4BP61018 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB4BP61018 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB4BP61018 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RAB4BP61018 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAB4BP61018 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RAB4BP61018 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB4BP61018 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB4BP61018 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB4BP61018 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB4BP61018 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.02■□□□□ 0.79
RAB4BP61018 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB4BP61018 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB4BP61018 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RAB4BP61018 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms