Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTR3AP46098 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.02■■□□□ 1.44
HTR3AP46098 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HTR3AP46098 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
HTR3AP46098 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HTR3AP46098 ST7-AS1-201ENST00000456775 1889 ntBASIC24■■□□□ 1.43
HTR3AP46098 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3AP46098 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3AP46098 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
HTR3AP46098 MIR762-201ENST00000390236 83 ntBASIC23.99■■□□□ 1.43
HTR3AP46098 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTR3AP46098 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.99■■□□□ 1.43
HTR3AP46098 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTR3AP46098 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.98■■□□□ 1.43
HTR3AP46098 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HTR3AP46098 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.96■■□□□ 1.43
HTR3AP46098 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.96■■□□□ 1.43
HTR3AP46098 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.95■■□□□ 1.42
HTR3AP46098 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HTR3AP46098 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HTR3AP46098 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HTR3AP46098 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HTR3AP46098 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HTR3AP46098 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
HTR3AP46098 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HTR3AP46098 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.94■■□□□ 1.42
HTR3AP46098 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HTR3AP46098 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
HTR3AP46098 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
HTR3AP46098 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HTR3AP46098 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
HTR3AP46098 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3AP46098 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.92■■□□□ 1.42
HTR3AP46098 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.91■■□□□ 1.42
HTR3AP46098 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HTR3AP46098 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
HTR3AP46098 AC010864.1-201ENST00000609407 1511 ntBASIC23.9■■□□□ 1.42
HTR3AP46098 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
HTR3AP46098 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HTR3AP46098 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HTR3AP46098 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
HTR3AP46098 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HTR3AP46098 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.89■■□□□ 1.41
HTR3AP46098 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
HTR3AP46098 AC135731.1-201ENST00000569415 2548 ntBASIC23.89■■□□□ 1.41
HTR3AP46098 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HTR3AP46098 AC005559.1-201ENST00000589661 871 ntBASIC23.88■■□□□ 1.41
HTR3AP46098 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
HTR3AP46098 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HTR3AP46098 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.87■■□□□ 1.41
HTR3AP46098 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HTR3AP46098 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3AP46098 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3AP46098 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3AP46098 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3AP46098 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.86■■□□□ 1.41
HTR3AP46098 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3AP46098 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3AP46098 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3AP46098 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3AP46098 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3AP46098 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HTR3AP46098 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3AP46098 AP006261.1-201ENST00000584783 668 ntBASIC23.84■■□□□ 1.41
HTR3AP46098 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3AP46098 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3AP46098 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3AP46098 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
HTR3AP46098 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
HTR3AP46098 MIR3665-201ENST00000578708 105 ntBASIC23.81■■□□□ 1.4
HTR3AP46098 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HTR3AP46098 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.81■■□□□ 1.4
HTR3AP46098 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HTR3AP46098 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HTR3AP46098 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3AP46098 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HTR3AP46098 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HTR3AP46098 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
HTR3AP46098 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HTR3AP46098 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR3AP46098 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR3AP46098 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3AP46098 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.77■■□□□ 1.4
HTR3AP46098 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3AP46098 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms