Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC40.89■■■■■ 4.14
RAPGEF3O95398 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
RAPGEF3O95398 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC40.87■■■■■ 4.13
RAPGEF3O95398 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
RAPGEF3O95398 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC40.87■■■■■ 4.13
RAPGEF3O95398 GPX1-201ENST00000419349 1106 ntBASIC40.85■■■■■ 4.13
RAPGEF3O95398 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
RAPGEF3O95398 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC40.84■■■■■ 4.13
RAPGEF3O95398 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
RAPGEF3O95398 CHML-204ENST00000638121 920 ntTSL 2 BASIC40.83■■■■■ 4.13
RAPGEF3O95398 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
RAPGEF3O95398 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC40.83■■■■■ 4.13
RAPGEF3O95398 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC40.82■■■■■ 4.13
RAPGEF3O95398 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC40.82■■■■■ 4.13
RAPGEF3O95398 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
RAPGEF3O95398 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC40.79■■■■■ 4.12
RAPGEF3O95398 RNF126P1-201ENST00000567452 1320 ntBASIC40.78■■■■■ 4.12
RAPGEF3O95398 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
RAPGEF3O95398 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC40.76■■■■■ 4.12
RAPGEF3O95398 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC40.74■■■■■ 4.11
RAPGEF3O95398 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC40.72■■■■■ 4.11
RAPGEF3O95398 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
RAPGEF3O95398 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC40.7■■■■■ 4.11
RAPGEF3O95398 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
RAPGEF3O95398 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC40.69■■■■■ 4.1
RAPGEF3O95398 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC40.69■■■■■ 4.1
RAPGEF3O95398 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC40.69■■■■■ 4.1
RAPGEF3O95398 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
RAPGEF3O95398 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
RAPGEF3O95398 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC40.67■■■■■ 4.1
RAPGEF3O95398 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
RAPGEF3O95398 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC40.65■■■■■ 4.1
RAPGEF3O95398 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
RAPGEF3O95398 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC40.63■■■■■ 4.09
RAPGEF3O95398 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
RAPGEF3O95398 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC40.61■■■■■ 4.09
RAPGEF3O95398 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
RAPGEF3O95398 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC40.61■■■■■ 4.09
RAPGEF3O95398 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
RAPGEF3O95398 TPT1-202ENST00000379055 948 ntTSL 2 BASIC40.6■■■■■ 4.09
RAPGEF3O95398 NTF6A-201ENST00000591175 560 ntBASIC40.59■■■■■ 4.09
RAPGEF3O95398 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC40.58■■■■■ 4.09
RAPGEF3O95398 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC40.58■■■■■ 4.09
RAPGEF3O95398 AC012354.3-201ENST00000623734 483 ntBASIC40.58■■■■■ 4.09
RAPGEF3O95398 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
RAPGEF3O95398 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC40.55■■■■■ 4.08
RAPGEF3O95398 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC40.55■■■■■ 4.08
RAPGEF3O95398 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
RAPGEF3O95398 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.54■■■■■ 4.08
RAPGEF3O95398 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
RAPGEF3O95398 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
RAPGEF3O95398 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
RAPGEF3O95398 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC40.53■■■■■ 4.08
RAPGEF3O95398 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC40.52■■■■■ 4.08
RAPGEF3O95398 CEP120-209ENST00000515110 606 ntTSL 3 BASIC40.52■■■■■ 4.08
RAPGEF3O95398 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC40.51■■■■■ 4.08
RAPGEF3O95398 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC40.5■■■■■ 4.07
RAPGEF3O95398 CHST11-202ENST00000546689 756 ntTSL 2 BASIC40.5■■■■■ 4.07
RAPGEF3O95398 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC40.48■■■■■ 4.07
RAPGEF3O95398 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC40.48■■■■■ 4.07
RAPGEF3O95398 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC40.46■■■■■ 4.07
RAPGEF3O95398 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC40.46■■■■■ 4.07
RAPGEF3O95398 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC40.46■■■■■ 4.07
RAPGEF3O95398 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
RAPGEF3O95398 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC40.44■■■■■ 4.06
RAPGEF3O95398 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
RAPGEF3O95398 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC40.43■■■■■ 4.06
RAPGEF3O95398 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
RAPGEF3O95398 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC40.39■■■■■ 4.06
RAPGEF3O95398 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC40.39■■■■■ 4.06
RAPGEF3O95398 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC40.37■■■■■ 4.05
RAPGEF3O95398 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC40.37■■■■■ 4.05
RAPGEF3O95398 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC40.37■■■■■ 4.05
RAPGEF3O95398 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
RAPGEF3O95398 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC40.36■■■■■ 4.05
RAPGEF3O95398 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.36■■■■■ 4.05
RAPGEF3O95398 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC40.35■■■■■ 4.05
RAPGEF3O95398 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC40.34■■■■■ 4.05
RAPGEF3O95398 AC008813.1-201ENST00000536597 885 ntBASIC40.34■■■■■ 4.05
RAPGEF3O95398 AL033527.3-201ENST00000566366 1196 ntBASIC40.34■■■■■ 4.05
RAPGEF3O95398 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
RAPGEF3O95398 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
RAPGEF3O95398 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC40.32■■■■■ 4.05
RAPGEF3O95398 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
RAPGEF3O95398 AC018358.1-201ENST00000631079 1402 ntBASIC40.32■■■■■ 4.04
RAPGEF3O95398 AC022413.1-201ENST00000624602 984 ntBASIC40.31■■■■■ 4.04
RAPGEF3O95398 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC40.31■■■■■ 4.04
RAPGEF3O95398 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC40.3■■■■■ 4.04
RAPGEF3O95398 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC40.29■■■■■ 4.04
RAPGEF3O95398 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC40.28■■■■■ 4.04
RAPGEF3O95398 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC40.28■■■■■ 4.04
RAPGEF3O95398 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
RAPGEF3O95398 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
RAPGEF3O95398 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
RAPGEF3O95398 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
RAPGEF3O95398 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
RAPGEF3O95398 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC40.25■■■■■ 4.03
RAPGEF3O95398 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
RAPGEF3O95398 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC40.25■■■■■ 4.03
RAPGEF3O95398 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms