Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MBD4O95243 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MBD4O95243 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MBD4O95243 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
MBD4O95243 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
MBD4O95243 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
MBD4O95243 AC010864.1-201ENST00000609407 1511 ntBASIC31.65■■■□□ 2.66
MBD4O95243 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MBD4O95243 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.64■■■□□ 2.66
MBD4O95243 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MBD4O95243 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
MBD4O95243 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.63■■■□□ 2.65
MBD4O95243 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.63■■■□□ 2.65
MBD4O95243 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.62■■■□□ 2.65
MBD4O95243 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.62■■■□□ 2.65
MBD4O95243 ABHD17AP4-201ENST00000411545 909 ntBASIC31.61■■■□□ 2.65
MBD4O95243 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.61■■■□□ 2.65
MBD4O95243 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.61■■■□□ 2.65
MBD4O95243 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
MBD4O95243 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
MBD4O95243 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
MBD4O95243 AL135925.1-201ENST00000605920 1701 ntBASIC31.59■■■□□ 2.65
MBD4O95243 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.59■■■□□ 2.65
MBD4O95243 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.58■■■□□ 2.65
MBD4O95243 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
MBD4O95243 AC021231.2-201ENST00000594613 730 ntBASIC31.57■■■□□ 2.64
MBD4O95243 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.57■■■□□ 2.64
MBD4O95243 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.57■■■□□ 2.64
MBD4O95243 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
MBD4O95243 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
MBD4O95243 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.56■■■□□ 2.64
MBD4O95243 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.56■■■□□ 2.64
MBD4O95243 DUX4L29-201ENST00000425409 679 ntBASIC31.56■■■□□ 2.64
MBD4O95243 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
MBD4O95243 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
MBD4O95243 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MBD4O95243 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
MBD4O95243 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
MBD4O95243 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MBD4O95243 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
MBD4O95243 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.48■■■□□ 2.63
MBD4O95243 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
MBD4O95243 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
MBD4O95243 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.48■■■□□ 2.63
MBD4O95243 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
MBD4O95243 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
MBD4O95243 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MBD4O95243 ZNRF2P2-203ENST00000454624 420 ntBASIC31.46■■■□□ 2.63
MBD4O95243 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.45■■■□□ 2.63
MBD4O95243 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MBD4O95243 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
MBD4O95243 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MBD4O95243 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
MBD4O95243 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.42■■■□□ 2.62
MBD4O95243 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.42■■■□□ 2.62
MBD4O95243 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
MBD4O95243 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.41■■■□□ 2.62
MBD4O95243 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.41■■■□□ 2.62
MBD4O95243 MIR7108-201ENST00000614319 87 ntBASIC31.41■■■□□ 2.62
MBD4O95243 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
MBD4O95243 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
MBD4O95243 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
MBD4O95243 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
MBD4O95243 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
MBD4O95243 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
MBD4O95243 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
MBD4O95243 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
MBD4O95243 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
MBD4O95243 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
MBD4O95243 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
MBD4O95243 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
MBD4O95243 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
MBD4O95243 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.37■■■□□ 2.61
MBD4O95243 ST7-AS1-201ENST00000456775 1889 ntBASIC31.37■■■□□ 2.61
MBD4O95243 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
MBD4O95243 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
MBD4O95243 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
MBD4O95243 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
MBD4O95243 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MBD4O95243 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MBD4O95243 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.33■■■□□ 2.61
MBD4O95243 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.33■■■□□ 2.61
MBD4O95243 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MBD4O95243 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
MBD4O95243 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.31■■■□□ 2.6
MBD4O95243 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
MBD4O95243 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MBD4O95243 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MBD4O95243 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MBD4O95243 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MBD4O95243 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.3■■■□□ 2.6
MBD4O95243 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.3■■■□□ 2.6
MBD4O95243 AC127502.1-201ENST00000399971 1502 ntBASIC31.29■■■□□ 2.6
MBD4O95243 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MBD4O95243 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
MBD4O95243 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.29■■■□□ 2.6
MBD4O95243 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MBD4O95243 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.29■■■□□ 2.6
MBD4O95243 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.28■■■□□ 2.6
MBD4O95243 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.26■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms