Protein–RNA interactions for Protein: O94761

RECQL4, ATP-dependent DNA helicase Q4, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4O94761 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RECQL4O94761 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.66■■■□□ 2.18
RECQL4O94761 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.66■■■□□ 2.18
RECQL4O94761 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.66■■■□□ 2.18
RECQL4O94761 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RECQL4O94761 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RECQL4O94761 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RECQL4O94761 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.64■■■□□ 2.17
RECQL4O94761 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RECQL4O94761 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RECQL4O94761 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RECQL4O94761 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
RECQL4O94761 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.62■■■□□ 2.17
RECQL4O94761 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RECQL4O94761 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.62■■■□□ 2.17
RECQL4O94761 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
RECQL4O94761 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
RECQL4O94761 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
RECQL4O94761 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RECQL4O94761 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
RECQL4O94761 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.57■■■□□ 2.16
RECQL4O94761 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RECQL4O94761 AC010864.1-201ENST00000609407 1511 ntBASIC28.57■■■□□ 2.16
RECQL4O94761 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.57■■■□□ 2.16
RECQL4O94761 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RECQL4O94761 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RECQL4O94761 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
RECQL4O94761 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RECQL4O94761 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RECQL4O94761 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
RECQL4O94761 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RECQL4O94761 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RECQL4O94761 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
RECQL4O94761 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RECQL4O94761 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RECQL4O94761 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.49■■■□□ 2.15
RECQL4O94761 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.49■■■□□ 2.15
RECQL4O94761 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.48■■■□□ 2.15
RECQL4O94761 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
RECQL4O94761 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.47■■■□□ 2.15
RECQL4O94761 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
RECQL4O94761 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.47■■■□□ 2.15
RECQL4O94761 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
RECQL4O94761 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RECQL4O94761 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
RECQL4O94761 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RECQL4O94761 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RECQL4O94761 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RECQL4O94761 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.44■■■□□ 2.14
RECQL4O94761 AL135925.1-201ENST00000605920 1701 ntBASIC28.42■■■□□ 2.14
RECQL4O94761 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.41■■■□□ 2.14
RECQL4O94761 LINC01971-201ENST00000617888 1048 ntBASIC28.41■■■□□ 2.14
RECQL4O94761 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RECQL4O94761 HLA-V-202ENST00000446817 847 ntBASIC28.4■■■□□ 2.14
RECQL4O94761 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
RECQL4O94761 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
RECQL4O94761 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.38■■■□□ 2.13
RECQL4O94761 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.38■■■□□ 2.13
RECQL4O94761 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RECQL4O94761 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.38■■■□□ 2.13
RECQL4O94761 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.37■■■□□ 2.13
RECQL4O94761 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.36■■■□□ 2.13
RECQL4O94761 DUX4L11-201ENST00000611504 1267 ntBASIC28.36■■■□□ 2.13
RECQL4O94761 DUX4L12-201ENST00000614593 1267 ntBASIC28.36■■■□□ 2.13
RECQL4O94761 DUX4L14-201ENST00000621227 1267 ntBASIC28.36■■■□□ 2.13
RECQL4O94761 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RECQL4O94761 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.35■■■□□ 2.13
RECQL4O94761 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RECQL4O94761 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
RECQL4O94761 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.34■■■□□ 2.13
RECQL4O94761 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RECQL4O94761 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.33■■■□□ 2.13
RECQL4O94761 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RECQL4O94761 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RECQL4O94761 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RECQL4O94761 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.33■■■□□ 2.12
RECQL4O94761 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RECQL4O94761 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RECQL4O94761 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RECQL4O94761 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RECQL4O94761 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RECQL4O94761 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RECQL4O94761 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
RECQL4O94761 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.29■■■□□ 2.12
RECQL4O94761 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.29■■■□□ 2.12
RECQL4O94761 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.28■■■□□ 2.12
RECQL4O94761 MIR3648-2-201ENST00000581792 180 ntBASIC28.28■■■□□ 2.12
RECQL4O94761 MIR3648-1-201ENST00000615959 180 ntBASIC28.28■■■□□ 2.12
RECQL4O94761 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RECQL4O94761 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.27■■■□□ 2.12
RECQL4O94761 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.27■■■□□ 2.12
RECQL4O94761 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RECQL4O94761 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.26■■■□□ 2.11
RECQL4O94761 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RECQL4O94761 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
RECQL4O94761 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.26■■■□□ 2.11
RECQL4O94761 CR559946.2-201ENST00000623684 991 ntBASIC28.26■■■□□ 2.11
RECQL4O94761 AC127502.1-201ENST00000399971 1502 ntBASIC28.26■■■□□ 2.11
RECQL4O94761 LINC00273-201ENST00000539813 1452 ntBASIC28.26■■■□□ 2.11
RECQL4O94761 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms