Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LOC100289279A0A1B0GTE1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LOC100289279A0A1B0GTE1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LOC100289279A0A1B0GTE1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LOC100289279A0A1B0GTE1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC100289279A0A1B0GTE1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LOC100289279A0A1B0GTE1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC100289279A0A1B0GTE1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC100289279A0A1B0GTE1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC100289279A0A1B0GTE1 WASH5P-204ENST00000632292 975 ntBASIC23.01■■□□□ 1.27
LOC100289279A0A1B0GTE1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
LOC100289279A0A1B0GTE1 MIR3665-201ENST00000578708 105 ntBASIC23■■□□□ 1.27
LOC100289279A0A1B0GTE1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LOC100289279A0A1B0GTE1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LOC100289279A0A1B0GTE1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LOC100289279A0A1B0GTE1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
LOC100289279A0A1B0GTE1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LOC100289279A0A1B0GTE1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.97■■□□□ 1.27
LOC100289279A0A1B0GTE1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
LOC100289279A0A1B0GTE1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC100289279A0A1B0GTE1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LOC100289279A0A1B0GTE1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LOC100289279A0A1B0GTE1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC100289279A0A1B0GTE1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
LOC100289279A0A1B0GTE1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC100289279A0A1B0GTE1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.94■■□□□ 1.26
LOC100289279A0A1B0GTE1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.94■■□□□ 1.26
LOC100289279A0A1B0GTE1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
LOC100289279A0A1B0GTE1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC100289279A0A1B0GTE1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LOC100289279A0A1B0GTE1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.93■■□□□ 1.26
LOC100289279A0A1B0GTE1 AL135925.1-201ENST00000605920 1701 ntBASIC22.93■■□□□ 1.26
LOC100289279A0A1B0GTE1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC100289279A0A1B0GTE1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LOC100289279A0A1B0GTE1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.92■■□□□ 1.26
LOC100289279A0A1B0GTE1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
LOC100289279A0A1B0GTE1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.91■■□□□ 1.26
LOC100289279A0A1B0GTE1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
LOC100289279A0A1B0GTE1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LOC100289279A0A1B0GTE1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LOC100289279A0A1B0GTE1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.9■■□□□ 1.26
LOC100289279A0A1B0GTE1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LOC100289279A0A1B0GTE1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LOC100289279A0A1B0GTE1 AC142086.6-201ENST00000621154 1765 ntBASIC22.89■■□□□ 1.26
LOC100289279A0A1B0GTE1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LOC100289279A0A1B0GTE1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
LOC100289279A0A1B0GTE1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.87■■□□□ 1.25
LOC100289279A0A1B0GTE1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LOC100289279A0A1B0GTE1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LOC100289279A0A1B0GTE1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
LOC100289279A0A1B0GTE1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LOC100289279A0A1B0GTE1 ABHD17AP4-201ENST00000411545 909 ntBASIC22.85■■□□□ 1.25
LOC100289279A0A1B0GTE1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LOC100289279A0A1B0GTE1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LOC100289279A0A1B0GTE1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LOC100289279A0A1B0GTE1 MIR7108-201ENST00000614319 87 ntBASIC22.84■■□□□ 1.25
LOC100289279A0A1B0GTE1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.84■■□□□ 1.25
LOC100289279A0A1B0GTE1 AC087741.3-201ENST00000624270 1347 ntBASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 MIR762-201ENST00000390236 83 ntBASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 DUX4L28-201ENST00000623687 678 ntBASIC22.83■■□□□ 1.25
LOC100289279A0A1B0GTE1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LOC100289279A0A1B0GTE1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LOC100289279A0A1B0GTE1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC100289279A0A1B0GTE1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC100289279A0A1B0GTE1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC100289279A0A1B0GTE1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC100289279A0A1B0GTE1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.82■■□□□ 1.24
LOC100289279A0A1B0GTE1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 AC005559.1-201ENST00000589661 871 ntBASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC100289279A0A1B0GTE1 AC044849.2-201ENST00000606596 710 ntBASIC22.8■■□□□ 1.24
LOC100289279A0A1B0GTE1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LOC100289279A0A1B0GTE1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC100289279A0A1B0GTE1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC100289279A0A1B0GTE1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC100289279A0A1B0GTE1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LOC100289279A0A1B0GTE1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms