Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV8-6A0A0B4J262 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV8-6A0A0B4J262 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRAV8-6A0A0B4J262 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-6A0A0B4J262 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV8-6A0A0B4J262 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.01■□□□□ 0.63
TRAV8-6A0A0B4J262 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19■□□□□ 0.63
TRAV8-6A0A0B4J262 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-6A0A0B4J262 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19■□□□□ 0.63
TRAV8-6A0A0B4J262 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TRAV8-6A0A0B4J262 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19■□□□□ 0.63
TRAV8-6A0A0B4J262 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TRAV8-6A0A0B4J262 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-6A0A0B4J262 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-6A0A0B4J262 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-6A0A0B4J262 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-6A0A0B4J262 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV8-6A0A0B4J262 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV8-6A0A0B4J262 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-6A0A0B4J262 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV8-6A0A0B4J262 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
TRAV8-6A0A0B4J262 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV8-6A0A0B4J262 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV8-6A0A0B4J262 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV8-6A0A0B4J262 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV8-6A0A0B4J262 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-6A0A0B4J262 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-6A0A0B4J262 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-6A0A0B4J262 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV8-6A0A0B4J262 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-6A0A0B4J262 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-6A0A0B4J262 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-6A0A0B4J262 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-6A0A0B4J262 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV8-6A0A0B4J262 RARRES2P7-201ENST00000567349 469 ntBASIC18.89■□□□□ 0.61
TRAV8-6A0A0B4J262 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-6A0A0B4J262 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-6A0A0B4J262 AC120057.4-201ENST00000624722 1615 ntBASIC18.89■□□□□ 0.61
TRAV8-6A0A0B4J262 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRAV8-6A0A0B4J262 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-6A0A0B4J262 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV8-6A0A0B4J262 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-6A0A0B4J262 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-6A0A0B4J262 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAV8-6A0A0B4J262 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV8-6A0A0B4J262 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-6A0A0B4J262 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV8-6A0A0B4J262 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-6A0A0B4J262 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-6A0A0B4J262 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-6A0A0B4J262 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.83■□□□□ 0.6
TRAV8-6A0A0B4J262 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-6A0A0B4J262 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-6A0A0B4J262 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV8-6A0A0B4J262 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV8-6A0A0B4J262 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-6A0A0B4J262 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-6A0A0B4J262 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-6A0A0B4J262 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-6A0A0B4J262 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-6A0A0B4J262 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV8-6A0A0B4J262 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV8-6A0A0B4J262 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV8-6A0A0B4J262 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-6A0A0B4J262 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV8-6A0A0B4J262 AC142086.6-201ENST00000621154 1765 ntBASIC18.78■□□□□ 0.6
TRAV8-6A0A0B4J262 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-6A0A0B4J262 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms