Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.35■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 AC010864.1-201ENST00000609407 1511 ntBASIC23.35■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IGKV1D-43A0A0B4J1Z2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.32■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.31■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.29■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 MIR762-201ENST00000390236 83 ntBASIC23.27■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
IGKV1D-43A0A0B4J1Z2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.26■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.25■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.23■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.22■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
IGKV1D-43A0A0B4J1Z2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.2■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.19■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 AL139393.2-201ENST00000608721 2025 ntBASIC23.18■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.16■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
IGKV1D-43A0A0B4J1Z2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.14■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.13■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.11■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 AC005559.1-201ENST00000589661 871 ntBASIC23.1■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.09■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.09■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.08■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
IGKV1D-43A0A0B4J1Z2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 DUX4L28-201ENST00000623687 678 ntBASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.06■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 AC127502.1-201ENST00000399971 1502 ntBASIC23.04■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.04■■□□□ 1.28
IGKV1D-43A0A0B4J1Z2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms