Protein–RNA interactions for Protein: A0A0A0MRZ8

IGKV3D-11, Immunoglobulin kappa variable 3D-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-11A0A0A0MRZ8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.69■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.68■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.68■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
IGKV3D-11A0A0A0MRZ8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.62■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.62■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.62■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.61■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.61■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.58■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.58■■□□□ 1.53
IGKV3D-11A0A0A0MRZ8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.57■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.56■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 ST7-AS1-201ENST00000456775 1889 ntBASIC24.55■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.54■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 DUX4L29-201ENST00000425409 679 ntBASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 AC021231.2-201ENST00000594613 730 ntBASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.52■■□□□ 1.52
IGKV3D-11A0A0A0MRZ8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.51■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 ABHD17AP4-201ENST00000411545 909 ntBASIC24.48■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.47■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.46■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
IGKV3D-11A0A0A0MRZ8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.45■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.45■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.41■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 AC127502.1-201ENST00000399971 1502 ntBASIC24.4■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 ZNRF2P2-203ENST00000454624 420 ntBASIC24.4■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IGKV3D-11A0A0A0MRZ8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.39■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.36■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IGKV3D-11A0A0A0MRZ8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms