Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AL020996.1-203ENST00000536896 2307 ntBASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM56-RWDD3S4R434 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM56-RWDD3S4R434 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM56-RWDD3S4R434 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM56-RWDD3S4R434 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 AC126544.1-201ENST00000580842 1059 ntBASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 AC105233.4-201ENST00000642045 216 ntBASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM56-RWDD3S4R434 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 MIR4767-201ENST00000582827 78 ntBASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms