RNA–Protein interactions for RNA: ENST00000469731.5

RNF8-204, Transcript of ring finger protein 8, humanhuman

TSL 5 BASIC

Gene RNF8, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-204ENST00000469731 NISCHQ9Y2I1 1504 aa48.49■■■■■ 5.35
RNF8-204ENST00000469731 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
RNF8-204ENST00000469731 ABCC9O60706 1549 aa41.76■■■■■ 4.28
RNF8-204ENST00000469731 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
RNF8-204ENST00000469731 DCAF8L2P0C7V8 631 aa40.32■■■■■ 4.05
RNF8-204ENST00000469731 NACADO15069 1562 aa40.27■■■■■ 4.04
RNF8-204ENST00000469731 RB1CC1Q8TDY2 1594 aa40.24■■■■■ 4.03
RNF8-204ENST00000469731 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
RNF8-204ENST00000469731 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
RNF8-204ENST00000469731 UNC13AQ9UPW8 1703 aa39.42■■■■□ 3.9
RNF8-204ENST00000469731 SCRIBQ14160 1630 aa39.24■■■■□ 3.87
RNF8-204ENST00000469731 BICRAQ9NZM4 1560 aa39.13■■■■□ 3.85
RNF8-204ENST00000469731 PABPN1Q86U42 306 aaKnown RBP eCLIP39.09■■■■□ 3.85
RNF8-204ENST00000469731 SHROOM4Q9ULL8 1493 aa38.61■■■■□ 3.77
RNF8-204ENST00000469731 DNAJC5BQ9UF47 199 aa38.13■■■■□ 3.69
RNF8-204ENST00000469731 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.68
RNF8-204ENST00000469731 CECR2Q9BXF3 1484 aa37.79■■■■□ 3.64
RNF8-204ENST00000469731 CC2D2AQ9P2K1 1620 aa37.78■■■■□ 3.64
RNF8-204ENST00000469731 SMARCA4P51532 1647 aa37.55■■■■□ 3.6
RNF8-204ENST00000469731 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.6
RNF8-204ENST00000469731 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
RNF8-204ENST00000469731 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
RNF8-204ENST00000469731 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
RNF8-204ENST00000469731 SMARCA2P51531 1590 aa37.19■■■■□ 3.54
RNF8-204ENST00000469731 PEG3Q9GZU2 1588 aa37.18■■■■□ 3.54
RNF8-204ENST00000469731 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
RNF8-204ENST00000469731 HMGXB3Q12766 1538 aa37.03■■■■□ 3.52
RNF8-204ENST00000469731 WIZO95785 1651 aa37.01■■■■□ 3.52
RNF8-204ENST00000469731 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
RNF8-204ENST00000469731 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
RNF8-204ENST00000469731 SUPT5HO00267 1087 aaKnown RBP36.32■■■■□ 3.41
RNF8-204ENST00000469731 NESP48681 1621 aa36.27■■■■□ 3.4
RNF8-204ENST00000469731 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
RNF8-204ENST00000469731 LAMC3Q9Y6N6 1575 aa36.13■■■■□ 3.37
RNF8-204ENST00000469731 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
RNF8-204ENST00000469731 CFTRP13569 1480 aa35.99■■■■□ 3.35
RNF8-204ENST00000469731 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
RNF8-204ENST00000469731 PDS5BQ9NTI5 1447 aa35.86■■■■□ 3.33
RNF8-204ENST00000469731 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
RNF8-204ENST00000469731 FANCD2Q9BXW9 1451 aa35.71■■■■□ 3.31
RNF8-204ENST00000469731 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
RNF8-204ENST00000469731 THOC2Q8NI27 1593 aaKnown RBP35.63■■■■□ 3.29
RNF8-204ENST00000469731 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
RNF8-204ENST00000469731 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
RNF8-204ENST00000469731 CUX2O14529 1486 aa35.42■■■■□ 3.26
RNF8-204ENST00000469731 WDR62O43379 1518 aa35.41■■■■□ 3.26
RNF8-204ENST00000469731 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
RNF8-204ENST00000469731 TOPBP1Q92547 1522 aa35.19■■■■□ 3.22
RNF8-204ENST00000469731 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
RNF8-204ENST00000469731 ABCC8Q09428 1581 aa35.11■■■■□ 3.21
RNF8-204ENST00000469731 CUX1P39880 1505 aa35.07■■■■□ 3.2
RNF8-204ENST00000469731 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
RNF8-204ENST00000469731 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
RNF8-204ENST00000469731 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
RNF8-204ENST00000469731 SYNJ1O43426 1573 aa34.86■■■■□ 3.17
RNF8-204ENST00000469731 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
RNF8-204ENST00000469731 TOP2BQ02880 1626 aa34.81■■■■□ 3.16
RNF8-204ENST00000469731 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
RNF8-204ENST00000469731 TARBP1Q13395 1621 aaKnown RBP34.8■■■■□ 3.16
RNF8-204ENST00000469731 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
RNF8-204ENST00000469731 ZNF608Q9ULD9 1512 aaPredicted RBP34.75■■■■□ 3.15
RNF8-204ENST00000469731 SOGA1O94964 1423 aa34.74■■■■□ 3.15
RNF8-204ENST00000469731 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
RNF8-204ENST00000469731 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
RNF8-204ENST00000469731 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.133e-8■□□□□ 11.2
RNF8-204ENST00000469731 TDRD9Q8NDG6 1382 aaKnown RBP34.55■■■■□ 3.12
RNF8-204ENST00000469731 ABCA10Q8WWZ4 1543 aa34.54■■■■□ 3.12
RNF8-204ENST00000469731 ABCA5Q8WWZ7 1642 aa34.4■■■■□ 3.1
RNF8-204ENST00000469731 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
RNF8-204ENST00000469731 GRIN2BQ13224 1484 aa34.3■■■■□ 3.08
RNF8-204ENST00000469731 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
RNF8-204ENST00000469731 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
RNF8-204ENST00000469731 TRIM41Q8WV44 630 aa34.25■■■■□ 3.07
RNF8-204ENST00000469731 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
RNF8-204ENST00000469731 KIF27Q86VH2 1401 aa34.12■■■■□ 3.05
RNF8-204ENST00000469731 CHIC1Q5VXU3 224 aa34.11■■■■□ 3.05
RNF8-204ENST00000469731 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
RNF8-204ENST00000469731 CHD1O14646 1710 aa34.09■■■■□ 3.05
RNF8-204ENST00000469731 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
RNF8-204ENST00000469731 ADAMTS12P58397 1594 aa34.04■■■■□ 3.04
RNF8-204ENST00000469731 RUSC2Q8N2Y8 1516 aa34.03■■■■□ 3.04
RNF8-204ENST00000469731 FBLN2P98095 1184 aa34.02■■■■□ 3.04
RNF8-204ENST00000469731 IGF1RP08069 1367 aa34.01■■■■□ 3.04
RNF8-204ENST00000469731 DNAJC5Q9H3Z4 198 aa34■■■■□ 3.03
RNF8-204ENST00000469731 OSCARQ8IYS5 282 aa34■■■■□ 3.03
RNF8-204ENST00000469731 CHMP7Q8WUX9 453 aaPredicted RBP33.97■■■■□ 3.03
RNF8-204ENST00000469731 FHAD1B1AJZ9 1412 aa33.95■■■■□ 3.03
RNF8-204ENST00000469731 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
RNF8-204ENST00000469731 CUL7Q14999 1698 aa33.84■■■■□ 3.01
RNF8-204ENST00000469731 CARMIL1Q5VZK9 1371 aa33.78■■■■□ 3
RNF8-204ENST00000469731 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
RNF8-204ENST00000469731 CEP170Q5SW79 1584 aa33.74■■■□□ 2.99
RNF8-204ENST00000469731 NUP160Q12769 1436 aa33.73■■■□□ 2.99
RNF8-204ENST00000469731 EEA1Q15075 1411 aa33.64■■■□□ 2.98
RNF8-204ENST00000469731 PRXQ9BXM0 1461 aa33.61■■■□□ 2.97
RNF8-204ENST00000469731 RAPGEF2Q9Y4G8 1499 aa33.6■■■□□ 2.97
RNF8-204ENST00000469731 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
RNF8-204ENST00000469731 FAM9AQ8IZU1 332 aaPredicted RBP33.58■■■□□ 2.97
RNF8-204ENST00000469731 ARHGEF11O15085 1522 aa33.51■■■□□ 2.95
RNF8-204ENST00000469731 RIMBP3CA6NJZ7 1639 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms