RNA–Protein interactions for RNA: ENST00000302495.4

HTRA4-201, Transcript of HtrA serine peptidase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA4, Length 2,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4-201ENST00000302495 NISCHQ9Y2I1 1504 aa40.85■■■■■ 4.13
HTRA4-201ENST00000302495 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
HTRA4-201ENST00000302495 ABCC9O60706 1549 aa34.76■■■■□ 3.15
HTRA4-201ENST00000302495 ZCCHC6Q5VYS8 1495 aaKnown RBP34.53■■■■□ 3.12
HTRA4-201ENST00000302495 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.12
HTRA4-201ENST00000302495 SUPT5HO00267 1087 aaKnown RBP33.83■■■■□ 3.01
HTRA4-201ENST00000302495 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
HTRA4-201ENST00000302495 DCAF1Q9Y4B6 1507 aa33.63■■■□□ 2.97
HTRA4-201ENST00000302495 NACADO15069 1562 aa33.63■■■□□ 2.97
HTRA4-201ENST00000302495 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
HTRA4-201ENST00000302495 MYO15BQ96JP2 1530 aa33.52■■■□□ 2.96
HTRA4-201ENST00000302495 CHIC1Q5VXU3 224 aa32.9■■■□□ 2.86
HTRA4-201ENST00000302495 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
HTRA4-201ENST00000302495 SCRIBQ14160 1630 aa32.75■■■□□ 2.83
HTRA4-201ENST00000302495 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
HTRA4-201ENST00000302495 PABPN1Q86U42 306 aaKnown RBP eCLIP32.52■■■□□ 2.8
HTRA4-201ENST00000302495 RSF1Q96T23 1441 aaPredicted RBP32.24■■■□□ 2.75
HTRA4-201ENST00000302495 LOC105371045A0A1W2PR82 267 aa31.83■■■□□ 2.69
HTRA4-201ENST00000302495 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
HTRA4-201ENST00000302495 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
HTRA4-201ENST00000302495 PCGF6Q9BYE7 350 aa31.68■■■□□ 2.66
HTRA4-201ENST00000302495 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
HTRA4-201ENST00000302495 HRCP23327 699 aa31.67■■■□□ 2.66
HTRA4-201ENST00000302495 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
HTRA4-201ENST00000302495 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
HTRA4-201ENST00000302495 WIZO95785 1651 aa31.49■■■□□ 2.63
HTRA4-201ENST00000302495 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
HTRA4-201ENST00000302495 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
HTRA4-201ENST00000302495 SMARCA4P51532 1647 aa31.34■■■□□ 2.61
HTRA4-201ENST00000302495 TRIM26Q12899 539 aaPredicted RBP31.24■■■□□ 2.59
HTRA4-201ENST00000302495 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
HTRA4-201ENST00000302495 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
HTRA4-201ENST00000302495 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
HTRA4-201ENST00000302495 ATAD2BQ9ULI0 1458 aa31.07■■■□□ 2.56
HTRA4-201ENST00000302495 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
HTRA4-201ENST00000302495 NCAPD3P42695 1498 aa31■■■□□ 2.55
HTRA4-201ENST00000302495 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
HTRA4-201ENST00000302495 HMGXB3Q12766 1538 aa30.91■■■□□ 2.54
HTRA4-201ENST00000302495 BAZ1BQ9UIG0 1483 aaKnown RBP30.86■■■□□ 2.53
HTRA4-201ENST00000302495 PPARGC1BQ86YN6 1023 aaKnown RBP30.86■■■□□ 2.53
HTRA4-201ENST00000302495 EHMT2Q96KQ7 1210 aa30.85■■■□□ 2.53
HTRA4-201ENST00000302495 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
HTRA4-201ENST00000302495 ZEB1P37275 1124 aaPredicted RBP30.58■■■□□ 2.49
HTRA4-201ENST00000302495 EEA1Q15075 1411 aa30.42■■■□□ 2.46
HTRA4-201ENST00000302495 SOGA1O94964 1423 aa30.41■■■□□ 2.46
HTRA4-201ENST00000302495 WRNQ14191 1432 aaPredicted RBP eCLIP30.3■■■□□ 2.44
HTRA4-201ENST00000302495 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
HTRA4-201ENST00000302495 TNIKQ9UKE5 1360 aa30.29■■■□□ 2.44
HTRA4-201ENST00000302495 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
HTRA4-201ENST00000302495 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
HTRA4-201ENST00000302495 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
HTRA4-201ENST00000302495 NESP48681 1621 aa30.16■■■□□ 2.42
HTRA4-201ENST00000302495 GOLGA3Q08378 1498 aa30.13■■■□□ 2.41
HTRA4-201ENST00000302495 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
HTRA4-201ENST00000302495 UBTFP17480 764 aaKnown RBP30.12■■■□□ 2.41
HTRA4-201ENST00000302495 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
HTRA4-201ENST00000302495 CFTRP13569 1480 aa30.01■■■□□ 2.4
HTRA4-201ENST00000302495 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
HTRA4-201ENST00000302495 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
HTRA4-201ENST00000302495 KIF21BO75037 1637 aa29.95■■■□□ 2.39
HTRA4-201ENST00000302495 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
HTRA4-201ENST00000302495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.89■■■□□ 2.38
HTRA4-201ENST00000302495 CCER1Q8TC90 406 aaPredicted RBP29.87■■■□□ 2.37
HTRA4-201ENST00000302495 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
HTRA4-201ENST00000302495 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
HTRA4-201ENST00000302495 KIF21AQ7Z4S6 1674 aa29.84■■■□□ 2.37
HTRA4-201ENST00000302495 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
HTRA4-201ENST00000302495 FANCD2Q9BXW9 1451 aa29.79■■■□□ 2.36
HTRA4-201ENST00000302495 CLIP1P30622 1438 aa29.75■■■□□ 2.35
HTRA4-201ENST00000302495 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
HTRA4-201ENST00000302495 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.35
HTRA4-201ENST00000302495 THOC2Q8NI27 1593 aaKnown RBP29.65■■■□□ 2.34
HTRA4-201ENST00000302495 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
HTRA4-201ENST00000302495 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
HTRA4-201ENST00000302495 CUX1P39880 1505 aa29.52■■■□□ 2.32
HTRA4-201ENST00000302495 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
HTRA4-201ENST00000302495 CUX2O14529 1486 aa29.51■■■□□ 2.31
HTRA4-201ENST00000302495 WDR62O43379 1518 aa29.51■■■□□ 2.31
HTRA4-201ENST00000302495 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
HTRA4-201ENST00000302495 APLP2Q06481 763 aa29.49■■■□□ 2.31
HTRA4-201ENST00000302495 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
HTRA4-201ENST00000302495 KIF27Q86VH2 1401 aa29.42■■■□□ 2.3
HTRA4-201ENST00000302495 RANGAP1P46060 587 aaPredicted RBP29.41■■■□□ 2.3
HTRA4-201ENST00000302495 DNMBPQ6XZF7 1577 aa29.36■■■□□ 2.29
HTRA4-201ENST00000302495 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
HTRA4-201ENST00000302495 HNRNPUL2Q1KMD3 747 aaKnown RBP29.31■■■□□ 2.28
HTRA4-201ENST00000302495 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
HTRA4-201ENST00000302495 DIEXFQ68CQ4 756 aaKnown RBP29.21■■■□□ 2.27
HTRA4-201ENST00000302495 PELP1Q8IZL8 1130 aaKnown RBP29.19■■■□□ 2.26
HTRA4-201ENST00000302495 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.26
HTRA4-201ENST00000302495 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
HTRA4-201ENST00000302495 FGD5Q6ZNL6 1462 aa29.11■■■□□ 2.25
HTRA4-201ENST00000302495 IFT140Q96RY7 1462 aa29.1■■■□□ 2.25
HTRA4-201ENST00000302495 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.25
HTRA4-201ENST00000302495 IGF1RP08069 1367 aa29.07■■■□□ 2.24
HTRA4-201ENST00000302495 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
HTRA4-201ENST00000302495 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
HTRA4-201ENST00000302495 TARBP1Q13395 1621 aaKnown RBP28.99■■■□□ 2.23
HTRA4-201ENST00000302495 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
HTRA4-201ENST00000302495 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms