RNA–Protein interactions for RNA: ENST00000580729.2

C17orf58-204, Transcript of chromosome 17 open reading frame 58, humanhuman

TSL 5 BASIC

Gene C17orf58, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf58-204ENST00000580729 NISCHQ9Y2I1 1504 aa44.39■■■■■ 4.7
C17orf58-204ENST00000580729 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
C17orf58-204ENST00000580729 ZCCHC6Q5VYS8 1495 aaKnown RBP37.32■■■■□ 3.57
C17orf58-204ENST00000580729 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
C17orf58-204ENST00000580729 SHROOM4Q9ULL8 1493 aa36.73■■■■□ 3.47
C17orf58-204ENST00000580729 DCAF1Q9Y4B6 1507 aa36.55■■■■□ 3.44
C17orf58-204ENST00000580729 ABCC9O60706 1549 aa36.45■■■■□ 3.43
C17orf58-204ENST00000580729 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
C17orf58-204ENST00000580729 NACADO15069 1562 aa35.81■■■■□ 3.32
C17orf58-204ENST00000580729 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
C17orf58-204ENST00000580729 SCRIBQ14160 1630 aa35.54■■■■□ 3.28
C17orf58-204ENST00000580729 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
C17orf58-204ENST00000580729 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
C17orf58-204ENST00000580729 RSF1Q96T23 1441 aaPredicted RBP34.69■■■■□ 3.14
C17orf58-204ENST00000580729 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
C17orf58-204ENST00000580729 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.12
C17orf58-204ENST00000580729 PABPN1Q86U42 306 aaKnown RBP eCLIP34.5■■■■□ 3.11
C17orf58-204ENST00000580729 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
C17orf58-204ENST00000580729 CHIC1Q5VXU3 224 aa34.21■■■■□ 3.07
C17orf58-204ENST00000580729 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
C17orf58-204ENST00000580729 WIZO95785 1651 aa34.13■■■■□ 3.05
C17orf58-204ENST00000580729 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
C17orf58-204ENST00000580729 TOP2AP11388 1531 aaKnown RBP33.62■■■□□ 2.97
C17orf58-204ENST00000580729 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
C17orf58-204ENST00000580729 ATAD2BQ9ULI0 1458 aa33.48■■■□□ 2.95
C17orf58-204ENST00000580729 CCDC88BA6NC98 1476 aa33.46■■■□□ 2.95
C17orf58-204ENST00000580729 EIF4G1Q04637 1599 aaKnown RBP33.45■■■□□ 2.95
C17orf58-204ENST00000580729 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
C17orf58-204ENST00000580729 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
C17orf58-204ENST00000580729 BAZ1BQ9UIG0 1483 aaKnown RBP33.24■■■□□ 2.91
C17orf58-204ENST00000580729 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
C17orf58-204ENST00000580729 LOC105371045A0A1W2PR82 267 aa33.07■■■□□ 2.88
C17orf58-204ENST00000580729 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
C17orf58-204ENST00000580729 CC2D2AQ9P2K1 1620 aa32.94■■■□□ 2.86
C17orf58-204ENST00000580729 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
C17orf58-204ENST00000580729 FAM9AQ8IZU1 332 aaPredicted RBP32.84■■■□□ 2.85
C17orf58-204ENST00000580729 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.8
C17orf58-204ENST00000580729 EHMT2Q96KQ7 1210 aa32.46■■■□□ 2.79
C17orf58-204ENST00000580729 CFTRP13569 1480 aa32.45■■■□□ 2.79
C17orf58-204ENST00000580729 SYNJ1O43426 1573 aa32.43■■■□□ 2.78
C17orf58-204ENST00000580729 SOGA1O94964 1423 aa32.43■■■□□ 2.78
C17orf58-204ENST00000580729 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
C17orf58-204ENST00000580729 RUSC2Q8N2Y8 1516 aa32.35■■■□□ 2.77
C17orf58-204ENST00000580729 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
C17orf58-204ENST00000580729 TOP2BQ02880 1626 aa32.19■■■□□ 2.74
C17orf58-204ENST00000580729 CSRNP3Q8WYN3 585 aa32.19■■■□□ 2.74
C17orf58-204ENST00000580729 PRDM2Q13029 1718 aa32.18■■■□□ 2.74
C17orf58-204ENST00000580729 EEA1Q15075 1411 aa32.13■■■□□ 2.73
C17orf58-204ENST00000580729 NESP48681 1621 aa32.1■■■□□ 2.73
C17orf58-204ENST00000580729 BIVM-ERCC5R4GMW8 1640 aa32.1■■■□□ 2.73
C17orf58-204ENST00000580729 CUX1P39880 1505 aa32.1■■■□□ 2.73
C17orf58-204ENST00000580729 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
C17orf58-204ENST00000580729 LAMC3Q9Y6N6 1575 aa31.91■■■□□ 2.7
C17orf58-204ENST00000580729 PCGF6Q9BYE7 350 aa31.86■■■□□ 2.69
C17orf58-204ENST00000580729 TNIKQ9UKE5 1360 aa31.84■■■□□ 2.69
C17orf58-204ENST00000580729 UBTFP17480 764 aaKnown RBP31.81■■■□□ 2.68
C17orf58-204ENST00000580729 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
C17orf58-204ENST00000580729 CEP164Q9UPV0 1460 aa31.75■■■□□ 2.67
C17orf58-204ENST00000580729 KIF21BO75037 1637 aa31.73■■■□□ 2.67
C17orf58-204ENST00000580729 CEP162Q5TB80 1403 aa31.72■■■□□ 2.67
C17orf58-204ENST00000580729 RAPGEF2Q9Y4G8 1499 aa31.69■■■□□ 2.66
C17orf58-204ENST00000580729 PDS5BQ9NTI5 1447 aa31.68■■■□□ 2.66
C17orf58-204ENST00000580729 FGD5Q6ZNL6 1462 aa31.67■■■□□ 2.66
C17orf58-204ENST00000580729 KIF27Q86VH2 1401 aa31.65■■■□□ 2.66
C17orf58-204ENST00000580729 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.65
C17orf58-204ENST00000580729 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
C17orf58-204ENST00000580729 KIF21AQ7Z4S6 1674 aa31.62■■■□□ 2.65
C17orf58-204ENST00000580729 TRIM26Q12899 539 aaPredicted RBP31.61■■■□□ 2.65
C17orf58-204ENST00000580729 PRXQ9BXM0 1461 aa31.6■■■□□ 2.65
C17orf58-204ENST00000580729 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
C17orf58-204ENST00000580729 CUX2O14529 1486 aa31.53■■■□□ 2.64
C17orf58-204ENST00000580729 PPARGC1BQ86YN6 1023 aaKnown RBP31.51■■■□□ 2.63
C17orf58-204ENST00000580729 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
C17orf58-204ENST00000580729 IGF1RP08069 1367 aa31.49■■■□□ 2.63
C17orf58-204ENST00000580729 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
C17orf58-204ENST00000580729 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
C17orf58-204ENST00000580729 CLIP1P30622 1438 aa31.37■■■□□ 2.61
C17orf58-204ENST00000580729 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
C17orf58-204ENST00000580729 RANGAP1P46060 587 aaPredicted RBP31.33■■■□□ 2.61
C17orf58-204ENST00000580729 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
C17orf58-204ENST00000580729 CARMIL1Q5VZK9 1371 aa31.27■■■□□ 2.6
C17orf58-204ENST00000580729 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
C17orf58-204ENST00000580729 TDRD9Q8NDG6 1382 aaKnown RBP31.16■■■□□ 2.58
C17orf58-204ENST00000580729 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
C17orf58-204ENST00000580729 HRCP23327 699 aa31.15■■■□□ 2.58
C17orf58-204ENST00000580729 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
C17orf58-204ENST00000580729 VPS8Q8N3P4 1428 aa31.12■■■□□ 2.57
C17orf58-204ENST00000580729 WDR62O43379 1518 aa31.12■■■□□ 2.57
C17orf58-204ENST00000580729 TTBK1Q5TCY1 1321 aaPredicted RBP31.1■■■□□ 2.57
C17orf58-204ENST00000580729 ABCA5Q8WWZ7 1642 aa31.08■■■□□ 2.57
C17orf58-204ENST00000580729 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
C17orf58-204ENST00000580729 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
C17orf58-204ENST00000580729 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
C17orf58-204ENST00000580729 ARHGAP35Q9NRY4 1499 aa30.99■■■□□ 2.55
C17orf58-204ENST00000580729 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.54
C17orf58-204ENST00000580729 CUL7Q14999 1698 aa30.93■■■□□ 2.54
C17orf58-204ENST00000580729 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
C17orf58-204ENST00000580729 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
C17orf58-204ENST00000580729 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
C17orf58-204ENST00000580729 APLP2Q06481 763 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms