RNA–Protein interactions for RNA: ENST00000538426.5

OTUB1-209, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OTUB1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-209ENST00000538426 NISCHQ9Y2I1 1504 aa47.02■■■■■ 5.12
OTUB1-209ENST00000538426 CCDC180Q9P1Z9 1646 aa41.12■■■■■ 4.17
OTUB1-209ENST00000538426 ZCCHC6Q5VYS8 1495 aaKnown RBP39.41■■■■□ 3.9
OTUB1-209ENST00000538426 ABCC9O60706 1549 aa39.28■■■■□ 3.88
OTUB1-209ENST00000538426 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
OTUB1-209ENST00000538426 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
OTUB1-209ENST00000538426 MYO15BQ96JP2 1530 aa38.44■■■■□ 3.74
OTUB1-209ENST00000538426 NACADO15069 1562 aa38.37■■■■□ 3.73
OTUB1-209ENST00000538426 SHROOM4Q9ULL8 1493 aa38.28■■■■□ 3.72
OTUB1-209ENST00000538426 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
OTUB1-209ENST00000538426 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
OTUB1-209ENST00000538426 UNC13AQ9UPW8 1703 aa37.42■■■■□ 3.58
OTUB1-209ENST00000538426 PABPN1Q86U42 306 aaKnown RBP eCLIP37.02■■■■□ 3.528e-7■■■■□ 25.6
OTUB1-209ENST00000538426 BICRAQ9NZM4 1560 aa37.02■■■■□ 3.52
OTUB1-209ENST00000538426 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
OTUB1-209ENST00000538426 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
OTUB1-209ENST00000538426 RSF1Q96T23 1441 aaPredicted RBP36.37■■■■□ 3.41
OTUB1-209ENST00000538426 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
OTUB1-209ENST00000538426 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
OTUB1-209ENST00000538426 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
OTUB1-209ENST00000538426 WIZO95785 1651 aa36.07■■■■□ 3.36
OTUB1-209ENST00000538426 EIF4G1Q04637 1599 aaKnown RBP35.94■■■■□ 3.34
OTUB1-209ENST00000538426 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
OTUB1-209ENST00000538426 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
OTUB1-209ENST00000538426 SMARCA2P51531 1590 aa35.65■■■■□ 3.3
OTUB1-209ENST00000538426 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
OTUB1-209ENST00000538426 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
OTUB1-209ENST00000538426 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
OTUB1-209ENST00000538426 NCAPD3P42695 1498 aa35.42■■■■□ 3.26
OTUB1-209ENST00000538426 HMGXB3Q12766 1538 aa35.33■■■■□ 3.25
OTUB1-209ENST00000538426 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
OTUB1-209ENST00000538426 DNAJC5BQ9UF47 199 aa34.95■■■■□ 3.19
OTUB1-209ENST00000538426 CHIC1Q5VXU3 224 aa34.86■■■■□ 3.17
OTUB1-209ENST00000538426 CFTRP13569 1480 aa34.56■■■■□ 3.12
OTUB1-209ENST00000538426 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
OTUB1-209ENST00000538426 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
OTUB1-209ENST00000538426 TRIM41Q8WV44 630 aa34.45■■■■□ 3.11
OTUB1-209ENST00000538426 NESP48681 1621 aa34.39■■■■□ 3.1
OTUB1-209ENST00000538426 PRDM2Q13029 1718 aa34.37■■■■□ 3.09
OTUB1-209ENST00000538426 LAMC3Q9Y6N6 1575 aa34.27■■■■□ 3.08
OTUB1-209ENST00000538426 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
OTUB1-209ENST00000538426 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
OTUB1-209ENST00000538426 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
OTUB1-209ENST00000538426 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
OTUB1-209ENST00000538426 CUX1P39880 1505 aa34.01■■■■□ 3.03
OTUB1-209ENST00000538426 TOP2BQ02880 1626 aa34■■■■□ 3.03
OTUB1-209ENST00000538426 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
OTUB1-209ENST00000538426 BIVM-ERCC5R4GMW8 1640 aa33.96■■■■□ 3.03
OTUB1-209ENST00000538426 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
OTUB1-209ENST00000538426 FAM9AQ8IZU1 332 aaPredicted RBP33.89■■■■□ 3.02
OTUB1-209ENST00000538426 DNMBPQ6XZF7 1577 aa33.78■■■■□ 3
OTUB1-209ENST00000538426 SOGA1O94964 1423 aa33.76■■■■□ 3
OTUB1-209ENST00000538426 URB2Q14146 1524 aaKnown RBP33.75■■■□□ 2.99
OTUB1-209ENST00000538426 TOPBP1Q92547 1522 aa33.75■■■□□ 2.99
OTUB1-209ENST00000538426 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
OTUB1-209ENST00000538426 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
OTUB1-209ENST00000538426 RUSC2Q8N2Y8 1516 aa33.68■■■□□ 2.98
OTUB1-209ENST00000538426 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
OTUB1-209ENST00000538426 LOC105371045A0A1W2PR82 267 aa33.59■■■□□ 2.97
OTUB1-209ENST00000538426 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
OTUB1-209ENST00000538426 EEA1Q15075 1411 aa33.54■■■□□ 2.96
OTUB1-209ENST00000538426 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
OTUB1-209ENST00000538426 EHMT2Q96KQ7 1210 aa33.49■■■□□ 2.95
OTUB1-209ENST00000538426 CSRNP3Q8WYN3 585 aa33.47■■■□□ 2.95
OTUB1-209ENST00000538426 WDR62O43379 1518 aa33.44■■■□□ 2.94
OTUB1-209ENST00000538426 THOC2Q8NI27 1593 aaKnown RBP33.44■■■□□ 2.94
OTUB1-209ENST00000538426 CUX2O14529 1486 aa33.42■■■□□ 2.94
OTUB1-209ENST00000538426 KIF27Q86VH2 1401 aa33.4■■■□□ 2.94
OTUB1-209ENST00000538426 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
OTUB1-209ENST00000538426 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
OTUB1-209ENST00000538426 TARBP1Q13395 1621 aaKnown RBP33.26■■■□□ 2.91
OTUB1-209ENST00000538426 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.91
OTUB1-209ENST00000538426 IFT140Q96RY7 1462 aa33.16■■■□□ 2.9
OTUB1-209ENST00000538426 IGF1RP08069 1367 aa33.15■■■□□ 2.9
OTUB1-209ENST00000538426 KIF21BO75037 1637 aa33.15■■■□□ 2.9
OTUB1-209ENST00000538426 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
OTUB1-209ENST00000538426 GOLGA3Q08378 1498 aa33.11■■■□□ 2.89
OTUB1-209ENST00000538426 PRXQ9BXM0 1461 aa33.08■■■□□ 2.89
OTUB1-209ENST00000538426 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
OTUB1-209ENST00000538426 RAPGEF2Q9Y4G8 1499 aa33.08■■■□□ 2.89
OTUB1-209ENST00000538426 UBTFP17480 764 aaKnown RBP33.06■■■□□ 2.88
OTUB1-209ENST00000538426 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
OTUB1-209ENST00000538426 AQRO60306 1485 aaKnown RBP eCLIP33.04■■■□□ 2.883e-10■■■■■ 44.3
OTUB1-209ENST00000538426 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
OTUB1-209ENST00000538426 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
OTUB1-209ENST00000538426 TNIKQ9UKE5 1360 aa32.93■■■□□ 2.86
OTUB1-209ENST00000538426 PBRM1Q86U86 1689 aa32.93■■■□□ 2.86
OTUB1-209ENST00000538426 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
OTUB1-209ENST00000538426 CUL7Q14999 1698 aa32.9■■■□□ 2.86
OTUB1-209ENST00000538426 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
OTUB1-209ENST00000538426 CEP162Q5TB80 1403 aa32.76■■■□□ 2.84
OTUB1-209ENST00000538426 RANGAP1P46060 587 aaPredicted RBP32.71■■■□□ 2.83
OTUB1-209ENST00000538426 SNAPC4Q5SXM2 1469 aa32.71■■■□□ 2.83
OTUB1-209ENST00000538426 ADAMTS12P58397 1594 aa32.71■■■□□ 2.83
OTUB1-209ENST00000538426 FHAD1B1AJZ9 1412 aa32.7■■■□□ 2.82
OTUB1-209ENST00000538426 MAGI1Q96QZ7 1491 aaPredicted RBP32.59■■■□□ 2.81
OTUB1-209ENST00000538426 CLIP1P30622 1438 aa32.59■■■□□ 2.81
OTUB1-209ENST00000538426 CTTNBP2Q8WZ74 1663 aa32.52■■■□□ 2.8
OTUB1-209ENST00000538426 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
OTUB1-209ENST00000538426 SYNJ2O15056 1496 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms