RNA–Protein interactions for RNA: ENST00000395829.1

TRABD-204, Transcript of TraB domain containing, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRABD, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-204ENST00000395829 NISCHQ9Y2I1 1504 aa47.41■■■■■ 5.18
TRABD-204ENST00000395829 CCDC180Q9P1Z9 1646 aa41.65■■■■■ 4.26
TRABD-204ENST00000395829 ZCCHC6Q5VYS8 1495 aaKnown RBP39.76■■■■□ 3.96
TRABD-204ENST00000395829 ABCC9O60706 1549 aa39.55■■■■□ 3.92
TRABD-204ENST00000395829 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
TRABD-204ENST00000395829 DCAF8L2P0C7V8 631 aa39.09■■■■□ 3.85
TRABD-204ENST00000395829 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
TRABD-204ENST00000395829 NACADO15069 1562 aa38.8■■■■□ 3.8
TRABD-204ENST00000395829 RB1CC1Q8TDY2 1594 aa38.56■■■■□ 3.76
TRABD-204ENST00000395829 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
TRABD-204ENST00000395829 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
TRABD-204ENST00000395829 UNC13AQ9UPW8 1703 aa37.92■■■■□ 3.66
TRABD-204ENST00000395829 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
TRABD-204ENST00000395829 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
TRABD-204ENST00000395829 CECR2Q9BXF3 1484 aa36.83■■■■□ 3.49
TRABD-204ENST00000395829 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
TRABD-204ENST00000395829 MROH2BQ7Z745 1585 aa36.6■■■■□ 3.45
TRABD-204ENST00000395829 SUPT5HO00267 1087 aaKnown RBP36.59■■■■□ 3.45
TRABD-204ENST00000395829 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
TRABD-204ENST00000395829 RSF1Q96T23 1441 aaPredicted RBP36.58■■■■□ 3.45
TRABD-204ENST00000395829 WIZO95785 1651 aa36.34■■■■□ 3.41
TRABD-204ENST00000395829 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
TRABD-204ENST00000395829 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
TRABD-204ENST00000395829 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
TRABD-204ENST00000395829 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
TRABD-204ENST00000395829 TOP2AP11388 1531 aaKnown RBP35.94■■■■□ 3.34
TRABD-204ENST00000395829 CC2D2AQ9P2K1 1620 aa35.87■■■■□ 3.33
TRABD-204ENST00000395829 BAZ1BQ9UIG0 1483 aaKnown RBP35.78■■■■□ 3.32
TRABD-204ENST00000395829 NCAPD3P42695 1498 aa35.76■■■■□ 3.31
TRABD-204ENST00000395829 HMGXB3Q12766 1538 aa35.74■■■■□ 3.31
TRABD-204ENST00000395829 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.27
TRABD-204ENST00000395829 DNAJC5BQ9UF47 199 aa35.17■■■■□ 3.22
TRABD-204ENST00000395829 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
TRABD-204ENST00000395829 CHIC1Q5VXU3 224 aa34.86■■■■□ 3.17
TRABD-204ENST00000395829 CFTRP13569 1480 aa34.85■■■■□ 3.17
TRABD-204ENST00000395829 CADPSQ9ULU8 1353 aa34.78■■■■□ 3.16
TRABD-204ENST00000395829 LAMC3Q9Y6N6 1575 aa34.67■■■■□ 3.14
TRABD-204ENST00000395829 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
TRABD-204ENST00000395829 NESP48681 1621 aa34.63■■■■□ 3.13
TRABD-204ENST00000395829 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
TRABD-204ENST00000395829 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
TRABD-204ENST00000395829 FANCD2Q9BXW9 1451 aa34.42■■■■□ 3.1
TRABD-204ENST00000395829 SYNJ1O43426 1573 aa34.39■■■■□ 3.1
TRABD-204ENST00000395829 KIF21AQ7Z4S6 1674 aa34.34■■■■□ 3.09
TRABD-204ENST00000395829 PDS5BQ9NTI5 1447 aa34.32■■■■□ 3.08
TRABD-204ENST00000395829 BIVM-ERCC5R4GMW8 1640 aa34.31■■■■□ 3.08
TRABD-204ENST00000395829 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
TRABD-204ENST00000395829 CUX1P39880 1505 aa34.26■■■■□ 3.08
TRABD-204ENST00000395829 CEP164Q9UPV0 1460 aa34.26■■■■□ 3.07
TRABD-204ENST00000395829 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
TRABD-204ENST00000395829 URB2Q14146 1524 aaKnown RBP34.03■■■■□ 3.04
TRABD-204ENST00000395829 TOPBP1Q92547 1522 aa34.03■■■■□ 3.04
TRABD-204ENST00000395829 ERCC6Q03468 1493 aa33.95■■■■□ 3.03
TRABD-204ENST00000395829 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.02
TRABD-204ENST00000395829 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
TRABD-204ENST00000395829 SOGA1O94964 1423 aa33.87■■■■□ 3.01
TRABD-204ENST00000395829 THOC2Q8NI27 1593 aaKnown RBP33.85■■■■□ 3.01
TRABD-204ENST00000395829 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3.01
TRABD-204ENST00000395829 WDR62O43379 1518 aa33.82■■■■□ 3.01
TRABD-204ENST00000395829 FAM9AQ8IZU1 332 aaPredicted RBP33.79■■■■□ 3
TRABD-204ENST00000395829 RUSC2Q8N2Y8 1516 aa33.78■■■■□ 3
TRABD-204ENST00000395829 EEA1Q15075 1411 aa33.76■■■■□ 3
TRABD-204ENST00000395829 WDR97A6NE52 1622 aa33.69■■■□□ 2.98
TRABD-204ENST00000395829 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
TRABD-204ENST00000395829 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
TRABD-204ENST00000395829 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
TRABD-204ENST00000395829 CUX2O14529 1486 aa33.61■■■□□ 2.97
TRABD-204ENST00000395829 KIF27Q86VH2 1401 aa33.6■■■□□ 2.97
TRABD-204ENST00000395829 CSRNP3Q8WYN3 585 aa33.53■■■□□ 2.96
TRABD-204ENST00000395829 LOC105371045A0A1W2PR82 267 aa33.48■■■□□ 2.95
TRABD-204ENST00000395829 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
TRABD-204ENST00000395829 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
TRABD-204ENST00000395829 KIF21BO75037 1637 aa33.42■■■□□ 2.94
TRABD-204ENST00000395829 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
TRABD-204ENST00000395829 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
TRABD-204ENST00000395829 IGF1RP08069 1367 aa33.31■■■□□ 2.92
TRABD-204ENST00000395829 PBRM1Q86U86 1689 aa33.31■■■□□ 2.92
TRABD-204ENST00000395829 EHMT2Q96KQ7 1210 aa33.3■■■□□ 2.92
TRABD-204ENST00000395829 PRXQ9BXM0 1461 aa33.29■■■□□ 2.92
TRABD-204ENST00000395829 GOLGA3Q08378 1498 aa33.27■■■□□ 2.92
TRABD-204ENST00000395829 ZNF608Q9ULD9 1512 aaPredicted RBP33.27■■■□□ 2.92
TRABD-204ENST00000395829 ERICH3Q5RHP9 1530 aa33.25■■■□□ 2.91
TRABD-204ENST00000395829 CUL7Q14999 1698 aa33.25■■■□□ 2.91
TRABD-204ENST00000395829 EIF4G3O43432 1585 aaKnown RBP33.24■■■□□ 2.91
TRABD-204ENST00000395829 AQRO60306 1485 aaKnown RBP eCLIP33.23■■■□□ 2.915e-7■■■■■ 29.5
TRABD-204ENST00000395829 RAPGEF2Q9Y4G8 1499 aa33.22■■■□□ 2.91
TRABD-204ENST00000395829 CARMIL1Q5VZK9 1371 aa33.15■■■□□ 2.9
TRABD-204ENST00000395829 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
TRABD-204ENST00000395829 TNIKQ9UKE5 1360 aa33.07■■■□□ 2.88
TRABD-204ENST00000395829 UBTFP17480 764 aaKnown RBP33.05■■■□□ 2.88
TRABD-204ENST00000395829 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
TRABD-204ENST00000395829 SNAPC4Q5SXM2 1469 aa32.96■■■□□ 2.87
TRABD-204ENST00000395829 FHAD1B1AJZ9 1412 aa32.95■■■□□ 2.86
TRABD-204ENST00000395829 MAGI1Q96QZ7 1491 aaPredicted RBP32.91■■■□□ 2.86
TRABD-204ENST00000395829 CTTNBP2Q8WZ74 1663 aa32.87■■■□□ 2.85
TRABD-204ENST00000395829 CEP162Q5TB80 1403 aa32.87■■■□□ 2.85
TRABD-204ENST00000395829 SYNJ2O15056 1496 aa32.77■■■□□ 2.84
TRABD-204ENST00000395829 GRIN2AQ12879 1464 aa32.73■■■□□ 2.83
TRABD-204ENST00000395829 CLIP1P30622 1438 aa32.69■■■□□ 2.82
TRABD-204ENST00000395829 CHD1O14646 1710 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms