RNA–Protein interactions for RNA: ENST00000419916.6

FAM213B-204, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM213B, Length 2,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-204ENST00000419916 NISCHQ9Y2I1 1504 aa39.33■■■■□ 3.89
FAM213B-204ENST00000419916 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
FAM213B-204ENST00000419916 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
FAM213B-204ENST00000419916 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
FAM213B-204ENST00000419916 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
FAM213B-204ENST00000419916 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
FAM213B-204ENST00000419916 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
FAM213B-204ENST00000419916 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
FAM213B-204ENST00000419916 HRCP23327 699 aa32.28■■■□□ 2.76
FAM213B-204ENST00000419916 PCGF6Q9BYE7 350 aa32.24■■■□□ 2.75
FAM213B-204ENST00000419916 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
FAM213B-204ENST00000419916 LOC105371045A0A1W2PR82 267 aa32.02■■■□□ 2.72
FAM213B-204ENST00000419916 PPARGC1BQ86YN6 1023 aaKnown RBP31.85■■■□□ 2.69
FAM213B-204ENST00000419916 ABCC9O60706 1549 aa31.46■■■□□ 2.63
FAM213B-204ENST00000419916 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
FAM213B-204ENST00000419916 RSF1Q96T23 1441 aaPredicted RBP31.36■■■□□ 2.61
FAM213B-204ENST00000419916 TRIM26Q12899 539 aaPredicted RBP31.33■■■□□ 2.61
FAM213B-204ENST00000419916 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
FAM213B-204ENST00000419916 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
FAM213B-204ENST00000419916 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
FAM213B-204ENST00000419916 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
FAM213B-204ENST00000419916 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
FAM213B-204ENST00000419916 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
FAM213B-204ENST00000419916 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
FAM213B-204ENST00000419916 WIZO95785 1651 aa30.57■■■□□ 2.48
FAM213B-204ENST00000419916 NACADO15069 1562 aa30.56■■■□□ 2.48
FAM213B-204ENST00000419916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
FAM213B-204ENST00000419916 BAZ1AQ9NRL2 1556 aaPredicted RBP30.22■■■□□ 2.43
FAM213B-204ENST00000419916 TTBK1Q5TCY1 1321 aaPredicted RBP30.21■■■□□ 2.43
FAM213B-204ENST00000419916 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
FAM213B-204ENST00000419916 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
FAM213B-204ENST00000419916 CCER1Q8TC90 406 aaPredicted RBP30.09■■■□□ 2.41
FAM213B-204ENST00000419916 SCAF1Q9H7N4 1312 aaKnown RBP30.06■■■□□ 2.4
FAM213B-204ENST00000419916 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
FAM213B-204ENST00000419916 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
FAM213B-204ENST00000419916 SOGA1O94964 1423 aa29.91■■■□□ 2.38
FAM213B-204ENST00000419916 SMARCA4P51532 1647 aa29.87■■■□□ 2.37
FAM213B-204ENST00000419916 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
FAM213B-204ENST00000419916 CEP162Q5TB80 1403 aa29.83■■■□□ 2.37
FAM213B-204ENST00000419916 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
FAM213B-204ENST00000419916 UBTFP17480 764 aaKnown RBP29.77■■■□□ 2.36
FAM213B-204ENST00000419916 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.35
FAM213B-204ENST00000419916 CSRNP3Q8WYN3 585 aa29.72■■■□□ 2.35
FAM213B-204ENST00000419916 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
FAM213B-204ENST00000419916 TNIKQ9UKE5 1360 aa29.67■■■□□ 2.34
FAM213B-204ENST00000419916 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
FAM213B-204ENST00000419916 DIEXFQ68CQ4 756 aaKnown RBP29.64■■■□□ 2.33
FAM213B-204ENST00000419916 NEUROD1Q13562 356 aa29.61■■■□□ 2.33
FAM213B-204ENST00000419916 ACIN1Q9UKV3 1341 aaKnown RBP29.57■■■□□ 2.32
FAM213B-204ENST00000419916 EEA1Q15075 1411 aa29.47■■■□□ 2.31
FAM213B-204ENST00000419916 GOLGA3Q08378 1498 aa29.44■■■□□ 2.3
FAM213B-204ENST00000419916 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
FAM213B-204ENST00000419916 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.3
FAM213B-204ENST00000419916 RANGAP1P46060 587 aaPredicted RBP29.37■■■□□ 2.29
FAM213B-204ENST00000419916 GTF3C3Q9Y5Q9 886 aa29.34■■■□□ 2.29
FAM213B-204ENST00000419916 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
FAM213B-204ENST00000419916 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
FAM213B-204ENST00000419916 ZNF316A6NFI3 1004 aaPredicted RBP29.28■■■□□ 2.28
FAM213B-204ENST00000419916 CENPBP07199 599 aaPredicted RBP29.27■■■□□ 2.28
FAM213B-204ENST00000419916 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
FAM213B-204ENST00000419916 CLIP1P30622 1438 aa29.21■■■□□ 2.27
FAM213B-204ENST00000419916 YTHDC1Q96MU7 727 aaKnown RBP29.18■■■□□ 2.26
FAM213B-204ENST00000419916 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
FAM213B-204ENST00000419916 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
FAM213B-204ENST00000419916 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
FAM213B-204ENST00000419916 APLP2Q06481 763 aa29.08■■■□□ 2.25
FAM213B-204ENST00000419916 KIF21BO75037 1637 aa29.08■■■□□ 2.25
FAM213B-204ENST00000419916 VPS8Q8N3P4 1428 aa29.05■■■□□ 2.24
FAM213B-204ENST00000419916 BAZ1BQ9UIG0 1483 aaKnown RBP29.05■■■□□ 2.24
FAM213B-204ENST00000419916 MIER1Q8N108 512 aa29.03■■■□□ 2.24
FAM213B-204ENST00000419916 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
FAM213B-204ENST00000419916 KANK4Q5T7N3 995 aaPredicted RBP28.77■■■□□ 2.2
FAM213B-204ENST00000419916 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
FAM213B-204ENST00000419916 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
FAM213B-204ENST00000419916 DHX57Q6P158 1386 aaKnown RBP28.63■■■□□ 2.17
FAM213B-204ENST00000419916 BIVM-ERCC5R4GMW8 1640 aa28.59■■■□□ 2.17
FAM213B-204ENST00000419916 ITGAEP38570 1179 aa28.56■■■□□ 2.16
FAM213B-204ENST00000419916 CUX1P39880 1505 aa28.54■■■□□ 2.16
FAM213B-204ENST00000419916 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
FAM213B-204ENST00000419916 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
FAM213B-204ENST00000419916 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
FAM213B-204ENST00000419916 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
FAM213B-204ENST00000419916 RRBP1Q9P2E9 1410 aaKnown RBP28.38■■■□□ 2.13
FAM213B-204ENST00000419916 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
FAM213B-204ENST00000419916 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
FAM213B-204ENST00000419916 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
FAM213B-204ENST00000419916 CFTRP13569 1480 aa28.29■■■□□ 2.12
FAM213B-204ENST00000419916 CUX2O14529 1486 aa28.22■■■□□ 2.11
FAM213B-204ENST00000419916 IGF1RP08069 1367 aa28.2■■■□□ 2.11
FAM213B-204ENST00000419916 RAB3GAP2Q9H2M9 1393 aa28.19■■■□□ 2.1
FAM213B-204ENST00000419916 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
FAM213B-204ENST00000419916 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
FAM213B-204ENST00000419916 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.1
FAM213B-204ENST00000419916 SUPT16HQ9Y5B9 1047 aaKnown RBP28.13■■■□□ 2.09
FAM213B-204ENST00000419916 FAM50AQ14320 339 aaKnown RBP28.11■■■□□ 2.09
FAM213B-204ENST00000419916 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
FAM213B-204ENST00000419916 SIN3AQ96ST3 1273 aa28.08■■■□□ 2.09
FAM213B-204ENST00000419916 PHLDB1Q86UU1 1377 aa28.06■■■□□ 2.08
FAM213B-204ENST00000419916 MAPKBP1O60336 1514 aa28.06■■■□□ 2.08
FAM213B-204ENST00000419916 TIAM1Q13009 1591 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms