RNA–Protein interactions for RNA: ENST00000392441.8

CCDC62-204, Transcript of coiled-coil domain containing 62, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC62, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62-204ENST00000392441 NISCHQ9Y2I1 1504 aa42.17■■■■■ 4.34
CCDC62-204ENST00000392441 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.34
CCDC62-204ENST00000392441 CCDC180Q9P1Z9 1646 aa35.91■■■■□ 3.34
CCDC62-204ENST00000392441 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
CCDC62-204ENST00000392441 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
CCDC62-204ENST00000392441 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.19
CCDC62-204ENST00000392441 DCAF1Q9Y4B6 1507 aa34.42■■■■□ 3.1
CCDC62-204ENST00000392441 ABCC9O60706 1549 aa34.08■■■■□ 3.05
CCDC62-204ENST00000392441 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
CCDC62-204ENST00000392441 CHIC1Q5VXU3 224 aa33.63■■■□□ 2.97
CCDC62-204ENST00000392441 MYO15BQ96JP2 1530 aa33.58■■■□□ 2.97
CCDC62-204ENST00000392441 NACADO15069 1562 aa33.4■■■□□ 2.94
CCDC62-204ENST00000392441 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
CCDC62-204ENST00000392441 CECR2Q9BXF3 1484 aa33.07■■■□□ 2.89
CCDC62-204ENST00000392441 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
CCDC62-204ENST00000392441 MROH2BQ7Z745 1585 aa32.84■■■□□ 2.85
CCDC62-204ENST00000392441 LOC105371045A0A1W2PR82 267 aa32.77■■■□□ 2.84
CCDC62-204ENST00000392441 WIZO95785 1651 aa32.63■■■□□ 2.81
CCDC62-204ENST00000392441 PABPN1Q86U42 306 aaKnown RBP eCLIP32.61■■■□□ 2.81
CCDC62-204ENST00000392441 TRIM41Q8WV44 630 aa32.54■■■□□ 2.8
CCDC62-204ENST00000392441 UNC13AQ9UPW8 1703 aa32.51■■■□□ 2.79
CCDC62-204ENST00000392441 FAM9AQ8IZU1 332 aaPredicted RBP32.43■■■□□ 2.78
CCDC62-204ENST00000392441 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
CCDC62-204ENST00000392441 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
CCDC62-204ENST00000392441 SMARCA4P51532 1647 aa32.2■■■□□ 2.75
CCDC62-204ENST00000392441 PCGF6Q9BYE7 350 aa32.19■■■□□ 2.74
CCDC62-204ENST00000392441 BICRAQ9NZM4 1560 aa32.17■■■□□ 2.74
CCDC62-204ENST00000392441 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
CCDC62-204ENST00000392441 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
CCDC62-204ENST00000392441 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
CCDC62-204ENST00000392441 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
CCDC62-204ENST00000392441 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
CCDC62-204ENST00000392441 HRCP23327 699 aa31.65■■■□□ 2.66
CCDC62-204ENST00000392441 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
CCDC62-204ENST00000392441 TRIM26Q12899 539 aaPredicted RBP31.51■■■□□ 2.63
CCDC62-204ENST00000392441 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
CCDC62-204ENST00000392441 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
CCDC62-204ENST00000392441 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
CCDC62-204ENST00000392441 SOGA1O94964 1423 aa31.42■■■□□ 2.62
CCDC62-204ENST00000392441 RUSC2Q8N2Y8 1516 aa31.31■■■□□ 2.6
CCDC62-204ENST00000392441 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
CCDC62-204ENST00000392441 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
CCDC62-204ENST00000392441 UBTFP17480 764 aaKnown RBP31.12■■■□□ 2.57
CCDC62-204ENST00000392441 SYNJ1O43426 1573 aa31.1■■■□□ 2.57
CCDC62-204ENST00000392441 TTBK1Q5TCY1 1321 aaPredicted RBP31.09■■■□□ 2.57
CCDC62-204ENST00000392441 NCAPD3P42695 1498 aa30.97■■■□□ 2.55
CCDC62-204ENST00000392441 CEP162Q5TB80 1403 aa30.96■■■□□ 2.55
CCDC62-204ENST00000392441 EEA1Q15075 1411 aa30.92■■■□□ 2.54
CCDC62-204ENST00000392441 TNIKQ9UKE5 1360 aa30.87■■■□□ 2.53
CCDC62-204ENST00000392441 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
CCDC62-204ENST00000392441 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
CCDC62-204ENST00000392441 GOLGA3Q08378 1498 aa30.79■■■□□ 2.52
CCDC62-204ENST00000392441 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
CCDC62-204ENST00000392441 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
CCDC62-204ENST00000392441 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
CCDC62-204ENST00000392441 CFTRP13569 1480 aa30.61■■■□□ 2.49
CCDC62-204ENST00000392441 CUX1P39880 1505 aa30.58■■■□□ 2.49
CCDC62-204ENST00000392441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.57■■■□□ 2.48
CCDC62-204ENST00000392441 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
CCDC62-204ENST00000392441 KIF21BO75037 1637 aa30.52■■■□□ 2.48
CCDC62-204ENST00000392441 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
CCDC62-204ENST00000392441 CLIP1P30622 1438 aa30.5■■■□□ 2.47
CCDC62-204ENST00000392441 ZEB1P37275 1124 aaPredicted RBP30.46■■■□□ 2.47
CCDC62-204ENST00000392441 CADPSQ9ULU8 1353 aa30.43■■■□□ 2.46
CCDC62-204ENST00000392441 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
CCDC62-204ENST00000392441 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
CCDC62-204ENST00000392441 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
CCDC62-204ENST00000392441 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
CCDC62-204ENST00000392441 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
CCDC62-204ENST00000392441 APLP2Q06481 763 aa30.23■■■□□ 2.43
CCDC62-204ENST00000392441 NESP48681 1621 aa30.21■■■□□ 2.43
CCDC62-204ENST00000392441 CUX2O14529 1486 aa30.2■■■□□ 2.43
CCDC62-204ENST00000392441 HNRNPUL2Q1KMD3 747 aaKnown RBP30.17■■■□□ 2.42
CCDC62-204ENST00000392441 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
CCDC62-204ENST00000392441 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
CCDC62-204ENST00000392441 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
CCDC62-204ENST00000392441 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
CCDC62-204ENST00000392441 IGF1RP08069 1367 aa30.08■■■□□ 2.41
CCDC62-204ENST00000392441 ARAP1Q96P48 1450 aa30.02■■■□□ 2.4
CCDC62-204ENST00000392441 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
CCDC62-204ENST00000392441 KANK4Q5T7N3 995 aaPredicted RBP29.98■■■□□ 2.39
CCDC62-204ENST00000392441 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
CCDC62-204ENST00000392441 ARHGAP35Q9NRY4 1499 aa29.87■■■□□ 2.37
CCDC62-204ENST00000392441 TOPBP1Q92547 1522 aa29.87■■■□□ 2.37
CCDC62-204ENST00000392441 P3H3Q8IVL6 736 aa29.86■■■□□ 2.37
CCDC62-204ENST00000392441 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
CCDC62-204ENST00000392441 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
CCDC62-204ENST00000392441 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
CCDC62-204ENST00000392441 ATP1B4Q9UN42 357 aaPredicted RBP29.72■■■□□ 2.35
CCDC62-204ENST00000392441 TDRD9Q8NDG6 1382 aaKnown RBP29.71■■■□□ 2.35
CCDC62-204ENST00000392441 ABCA10Q8WWZ4 1543 aa29.68■■■□□ 2.34
CCDC62-204ENST00000392441 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
CCDC62-204ENST00000392441 ITGAEP38570 1179 aa29.65■■■□□ 2.34
CCDC62-204ENST00000392441 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
CCDC62-204ENST00000392441 FHOD3Q2V2M9 1422 aa29.53■■■□□ 2.32
CCDC62-204ENST00000392441 KIF21AQ7Z4S6 1674 aa29.52■■■□□ 2.32
CCDC62-204ENST00000392441 GAPVD1Q14C86 1478 aa29.44■■■□□ 2.3
CCDC62-204ENST00000392441 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
CCDC62-204ENST00000392441 CCNB3Q8WWL7 1395 aa29.42■■■□□ 2.3
CCDC62-204ENST00000392441 RRBP1Q9P2E9 1410 aaKnown RBP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms