Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 AGAP1-210ENST00000466575 541 ntTSL 316.78■□□□□ 0.285e-8■■■■□ 20.7
DKC1O60832 PACSIN2-210ENST00000453643 818 ntTSL 517.85■□□□□ 0.452e-11■■■■□ 20.6
DKC1O60832 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.232e-11■■■■□ 20.6
DKC1O60832 PACSIN2-207ENST00000422336 664 ntTSL 513.62□□□□□ -0.232e-11■■■■□ 20.6
DKC1O60832 PACSIN2-208ENST00000445706 511 ntTSL 512.91□□□□□ -0.342e-11■■■■□ 20.6
DKC1O60832 ATP5B-203ENST00000547808 705 ntTSL 521.37■■□□□ 1.011e-323■■■■□ 20.6
DKC1O60832 ATP5B-211ENST00000553007 814 ntTSL 521.22■□□□□ 0.991e-323■■■■□ 20.6
DKC1O60832 ATP5B-207ENST00000551020 856 ntTSL 321.22■□□□□ 0.991e-323■■■■□ 20.6
DKC1O60832 ATP5B-210ENST00000552959 1085 ntTSL 320.93■□□□□ 0.941e-323■■■■□ 20.6
DKC1O60832 ATP5B-205ENST00000548647 682 ntTSL 517.85■□□□□ 0.451e-323■■■■□ 20.6
DKC1O60832 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.451e-323■■■■□ 20.6
DKC1O60832 ATP5B-204ENST00000548474 449 ntTSL 37.02□□□□□ -1.291e-323■■■■□ 20.6
DKC1O60832 RDX-203ENST00000527537 3403 ntTSL 1 (best)7.14□□□□□ -1.272e-19■■■■□ 20.6
DKC1O60832 RDX-213ENST00000532461 3286 ntTSL 1 (best)6.25□□□□□ -1.412e-19■■■■□ 20.6
DKC1O60832 PLCB1-220ENST00000630757 857 ntTSL 36.07□□□□□ -1.444e-11■■■■□ 20.6
DKC1O60832 PLCB1-229ENST00000637204 100 ntTSL 52.16□□□□□ -2.064e-11■■■■□ 20.6
DKC1O60832 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.733e-16■■■■□ 20.6
DKC1O60832 FREM1-201ENST00000380875 6126 ntTSL 1 (best)10.42□□□□□ -0.743e-16■■■■□ 20.6
DKC1O60832 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.833e-16■■■■□ 20.6
DKC1O60832 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.162e-18■■■■□ 20.5
DKC1O60832 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.292e-18■■■■□ 20.5
DKC1O60832 GNL3-211ENST00000496254 2118 ntTSL 56.11□□□□□ -1.432e-18■■■■□ 20.5
DKC1O60832 GNL3-209ENST00000484022 668 ntTSL 24.35□□□□□ -1.712e-18■■■■□ 20.5
DKC1O60832 RABGGTB-204ENST00000461653 1702 ntTSL 55.22□□□□□ -1.572e-86■■■■□ 20.4
DKC1O60832 RABGGTB-211ENST00000489450 586 ntTSL 53□□□□□ -1.932e-86■■■■□ 20.4
DKC1O60832 SNORD36C-201ENST00000516733 66 ntBASIC0.46□□□□□ -2.341e-323■■■■□ 20.4
DKC1O60832 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.44■■■□□ 2.34e-8■■■■□ 20.4
DKC1O60832 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.89■■■□□ 2.224e-8■■■■□ 20.4
DKC1O60832 SLC6A9-209ENST00000492434 592 ntTSL 325.18■■□□□ 1.624e-8■■■■□ 20.4
DKC1O60832 PAICS-203ENST00000504188 491 ntTSL 223.99■■□□□ 1.435e-6■■■■□ 20.4
DKC1O60832 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.22■■□□□ 1.313e-15■■■■□ 20.4
DKC1O60832 AGAP3-209ENST00000469901 582 ntTSL 322.25■■□□□ 1.154e-8■■■■□ 20.4
DKC1O60832 SLC6A9-208ENST00000489764 930 ntTSL 320.81■□□□□ 0.924e-8■■■■□ 20.4
DKC1O60832 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.864e-8■■■■□ 20.4
DKC1O60832 PROX1-204ENST00000471129 900 ntTSL 319.33■□□□□ 0.683e-15■■■■□ 20.4
DKC1O60832 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.623e-6■■■■□ 20.4
DKC1O60832 NOS1AP-202ENST00000430120 1732 ntTSL 1 (best)18.64■□□□□ 0.573e-6■■■■□ 20.4
DKC1O60832 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.433e-15■■■■□ 20.4
DKC1O60832 PAICS-204ENST00000505164 1514 ntTSL 217.05■□□□□ 0.325e-6■■■■□ 20.4
DKC1O60832 AGAP3-221ENST00000490097 604 ntTSL 417■□□□□ 0.314e-8■■■■□ 20.4
DKC1O60832 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.243e-6■■■■□ 20.4
DKC1O60832 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.26■□□□□ 0.194e-8■■■■□ 20.4
DKC1O60832 ZNF644-211ENST00000498303 514 ntTSL 1 (best)16.07■□□□□ 0.163e-15■■■■□ 20.4
DKC1O60832 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.74■□□□□ 0.114e-8■■■■□ 20.4
DKC1O60832 AGAP3-214ENST00000476375 1019 ntTSL 514.84□□□□□ -0.034e-8■■■■□ 20.4
DKC1O60832 AGAP3-223ENST00000492234 560 ntTSL 414.76□□□□□ -0.054e-8■■■■□ 20.4
DKC1O60832 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.074e-8■■■■□ 20.4
DKC1O60832 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.164e-8■■■■□ 20.4
DKC1O60832 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.237e-7■■■■□ 20.4
DKC1O60832 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.5□□□□□ -0.254e-8■■■■□ 20.4
DKC1O60832 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC13.47□□□□□ -0.257e-7■■■■□ 20.4
DKC1O60832 CLSTN3-206ENST00000535668 566 ntTSL 312.6□□□□□ -0.394e-8■■■■□ 20.4
DKC1O60832 SLC6A9-206ENST00000466926 591 ntTSL 312.54□□□□□ -0.44e-8■■■■□ 20.4
DKC1O60832 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.414e-8■■■■□ 20.4
DKC1O60832 SLC6A6-207ENST00000618278 6401 ntTSL 512.38□□□□□ -0.437e-7■■■■□ 20.4
DKC1O60832 PAICS-206ENST00000510584 557 ntTSL 212.28□□□□□ -0.445e-6■■■■□ 20.4
DKC1O60832 PVT1-209ENST00000520913 584 ntTSL 212.07□□□□□ -0.484e-8■■■■□ 20.4
DKC1O60832 PROX1-206ENST00000607425 560 ntTSL 312□□□□□ -0.493e-15■■■■□ 20.4
DKC1O60832 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.564e-8■■■■□ 20.4
DKC1O60832 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC10.55□□□□□ -0.723e-15■■■■□ 20.4
DKC1O60832 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.735e-6■■■■□ 20.4
DKC1O60832 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC10.26□□□□□ -0.777e-7■■■■□ 20.4
DKC1O60832 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC9.41□□□□□ -0.97e-7■■■■□ 20.4
DKC1O60832 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.72□□□□□ -1.015e-6■■■■□ 20.4
DKC1O60832 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.67□□□□□ -1.027e-7■■■■□ 20.4
DKC1O60832 CUX1-219ENST00000606749 601 ntTSL 48.54□□□□□ -1.044e-8■■■■□ 20.4
DKC1O60832 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.5□□□□□ -1.054e-8■■■■□ 20.4
DKC1O60832 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.64□□□□□ -1.195e-6■■■■□ 20.4
DKC1O60832 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.44□□□□□ -1.224e-8■■■■□ 20.4
DKC1O60832 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.253e-15■■■■□ 20.4
DKC1O60832 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.21□□□□□ -1.257e-7■■■■□ 20.4
DKC1O60832 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.95□□□□□ -1.34e-8■■■■□ 20.4
DKC1O60832 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.74□□□□□ -1.334e-8■■■■□ 20.4
DKC1O60832 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.345e-6■■■■□ 20.4
DKC1O60832 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.427e-7■■■■□ 20.4
DKC1O60832 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.594e-8■■■■□ 20.4
DKC1O60832 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.48□□□□□ -1.854e-8■■■■□ 20.4
DKC1O60832 ZNF644-205ENST00000467231 851 ntTSL 32.61□□□□□ -1.993e-15■■■■□ 20.4
DKC1O60832 SNORD116-6-201ENST00000384711 96 ntBASIC2.33□□□□□ -2.044e-8■■■■□ 20.4
DKC1O60832 DUS1L-211ENST00000578907 1084 ntTSL 331.18■■■□□ 2.584e-7■■■■□ 20.4
DKC1O60832 DUS1L-215ENST00000582529 1212 ntTSL 529.63■■■□□ 2.334e-7■■■■□ 20.4
DKC1O60832 DUS1L-206ENST00000577907 648 ntTSL 329.2■■■□□ 2.264e-7■■■■□ 20.4
DKC1O60832 DUS1L-207ENST00000578176 937 ntTSL 528.86■■■□□ 2.214e-7■■■■□ 20.4
DKC1O60832 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.874e-7■■■■□ 20.4
DKC1O60832 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.774e-7■■■■□ 20.4
DKC1O60832 AC016708.1-201ENST00000607412 1909 ntTSL 2 BASIC11.45□□□□□ -0.583e-9■■■■□ 20.2
DKC1O60832 SNORA70I-201ENST00000384544 135 ntBASIC8.71□□□□□ -1.023e-9■■■■□ 20.2
DKC1O60832 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC13.19□□□□□ -0.32e-6■■■■□ 20.2
DKC1O60832 WDR27-205ENST00000467418 947 ntTSL 511.53□□□□□ -0.561e-9■■■■□ 20.2
DKC1O60832 AC124312.3-201ENST00000567527 1236 ntBASIC12.91□□□□□ -0.348e-13■■■■□ 20.1
DKC1O60832 CCDC142-203ENST00000454193 2309 ntTSL 220.81■□□□□ 0.922e-11■■■■□ 20
DKC1O60832 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.512e-11■■■■□ 20
DKC1O60832 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.082e-11■■■■□ 20
DKC1O60832 CCDC142-209ENST00000497232 671 ntTSL 312.19□□□□□ -0.462e-11■■■■□ 20
DKC1O60832 GTPBP1-203ENST00000458073 1350 ntTSL 516.51■□□□□ 0.235e-6■■■■□ 20
DKC1O60832 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.165e-6■■■■□ 20
DKC1O60832 GTPBP1-210ENST00000484971 582 ntTSL 315.54■□□□□ 0.085e-6■■■■□ 20
DKC1O60832 GTPBP1-206ENST00000462332 3035 ntTSL 211.88□□□□□ -0.515e-6■■■■□ 20
DKC1O60832 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.12e-6■■■■□ 20
DKC1O60832 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.67■□□□□ 0.12e-6■■■■□ 20
Retrieved 100 of 8,567 protein–RNA pairs in 158.1 ms