RNA–Protein interactions for RNA: ENST00000469901.5

AGAP3-209, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-209ENST00000469901 NISCHQ9Y2I1 1504 aa49.22■■■■■ 5.47
AGAP3-209ENST00000469901 CCDC180Q9P1Z9 1646 aa44.15■■■■■ 4.66
AGAP3-209ENST00000469901 ABCC9O60706 1549 aa43.83■■■■■ 4.61
AGAP3-209ENST00000469901 RB1CC1Q8TDY2 1594 aa41.91■■■■■ 4.3
AGAP3-209ENST00000469901 NACADO15069 1562 aa41.67■■■■■ 4.26
AGAP3-209ENST00000469901 DCAF8L2P0C7V8 631 aa41.4■■■■■ 4.22
AGAP3-209ENST00000469901 MYO15BQ96JP2 1530 aa41.19■■■■■ 4.18
AGAP3-209ENST00000469901 UNC13AQ9UPW8 1703 aa40.88■■■■■ 4.13
AGAP3-209ENST00000469901 ZCCHC6Q5VYS8 1495 aaKnown RBP40.85■■■■■ 4.13
AGAP3-209ENST00000469901 DNAJC5BQ9UF47 199 aa40.79■■■■■ 4.12
AGAP3-209ENST00000469901 PABPN1Q86U42 306 aaKnown RBP eCLIP40.78■■■■■ 4.12
AGAP3-209ENST00000469901 DCAF1Q9Y4B6 1507 aa40.73■■■■■ 4.11
AGAP3-209ENST00000469901 BICRAQ9NZM4 1560 aa40.57■■■■■ 4.09
AGAP3-209ENST00000469901 SHROOM4Q9ULL8 1493 aa40.22■■■■■ 4.03
AGAP3-209ENST00000469901 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
AGAP3-209ENST00000469901 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
AGAP3-209ENST00000469901 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
AGAP3-209ENST00000469901 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
AGAP3-209ENST00000469901 NCAPD3P42695 1498 aa38.43■■■■□ 3.74
AGAP3-209ENST00000469901 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
AGAP3-209ENST00000469901 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.72
AGAP3-209ENST00000469901 SMARCA2P51531 1590 aa38.3■■■■□ 3.72
AGAP3-209ENST00000469901 BAZ1AQ9NRL2 1556 aaPredicted RBP38.24■■■■□ 3.71
AGAP3-209ENST00000469901 HMGXB3Q12766 1538 aa38.2■■■■□ 3.71
AGAP3-209ENST00000469901 BAZ1BQ9UIG0 1483 aaKnown RBP38.01■■■■□ 3.67
AGAP3-209ENST00000469901 PEG3Q9GZU2 1588 aa38.01■■■■□ 3.67
AGAP3-209ENST00000469901 ERCC6Q03468 1493 aa37.9■■■■□ 3.66
AGAP3-209ENST00000469901 MROH2BQ7Z745 1585 aa37.88■■■■□ 3.65
AGAP3-209ENST00000469901 CUX2O14529 1486 aa37.77■■■■□ 3.64
AGAP3-209ENST00000469901 NESP48681 1621 aa37.67■■■■□ 3.62
AGAP3-209ENST00000469901 LAMC3Q9Y6N6 1575 aa37.57■■■■□ 3.6
AGAP3-209ENST00000469901 WIZO95785 1651 aa37.44■■■■□ 3.58
AGAP3-209ENST00000469901 DNAJC5Q9H3Z4 198 aa37.42■■■■□ 3.58
AGAP3-209ENST00000469901 PDS5BQ9NTI5 1447 aa37.35■■■■□ 3.57
AGAP3-209ENST00000469901 THOC2Q8NI27 1593 aaKnown RBP37.31■■■■□ 3.56
AGAP3-209ENST00000469901 CADPSQ9ULU8 1353 aa37.27■■■■□ 3.56
AGAP3-209ENST00000469901 KIF21AQ7Z4S6 1674 aa37.25■■■■□ 3.55
AGAP3-209ENST00000469901 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
AGAP3-209ENST00000469901 TOP2AP11388 1531 aaKnown RBP37.05■■■■□ 3.52
AGAP3-209ENST00000469901 MRC2Q9UBG0 1479 aa36.99■■■■□ 3.51
AGAP3-209ENST00000469901 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
AGAP3-209ENST00000469901 WDR62O43379 1518 aa36.89■■■■□ 3.5
AGAP3-209ENST00000469901 CFTRP13569 1480 aa36.88■■■■□ 3.5
AGAP3-209ENST00000469901 FANCD2Q9BXW9 1451 aa36.85■■■■□ 3.49
AGAP3-209ENST00000469901 PRDM2Q13029 1718 aa36.6■■■■□ 3.45
AGAP3-209ENST00000469901 CCDC88BA6NC98 1476 aa36.57■■■■□ 3.45
AGAP3-209ENST00000469901 URB2Q14146 1524 aaKnown RBP36.49■■■■□ 3.43
AGAP3-209ENST00000469901 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
AGAP3-209ENST00000469901 TOPBP1Q92547 1522 aa36.17■■■■□ 3.38
AGAP3-209ENST00000469901 IFT140Q96RY7 1462 aa36.16■■■■□ 3.38
AGAP3-209ENST00000469901 DNMBPQ6XZF7 1577 aa36.09■■■■□ 3.37
AGAP3-209ENST00000469901 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
AGAP3-209ENST00000469901 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
AGAP3-209ENST00000469901 EIF4G3O43432 1585 aaKnown RBP35.86■■■■□ 3.33
AGAP3-209ENST00000469901 TRIM41Q8WV44 630 aa35.85■■■■□ 3.33
AGAP3-209ENST00000469901 TARBP1Q13395 1621 aaKnown RBP35.82■■■■□ 3.32
AGAP3-209ENST00000469901 POLA1P09884 1462 aaPredicted RBP35.8■■■■□ 3.32
AGAP3-209ENST00000469901 AQRO60306 1485 aaKnown RBP eCLIP35.69■■■■□ 3.33e-7■■■■■ 28.3
AGAP3-209ENST00000469901 SUPT5HO00267 1087 aaKnown RBP35.68■■■■□ 3.3
AGAP3-209ENST00000469901 SOGA1O94964 1423 aa35.65■■■■□ 3.3
AGAP3-209ENST00000469901 FGD5Q6ZNL6 1462 aa35.61■■■■□ 3.29
AGAP3-209ENST00000469901 RAD54L2Q9Y4B4 1467 aa35.61■■■■□ 3.29
AGAP3-209ENST00000469901 CUX1P39880 1505 aa35.59■■■■□ 3.29
AGAP3-209ENST00000469901 WDR97A6NE52 1622 aa35.59■■■■□ 3.29
AGAP3-209ENST00000469901 CHD1O14646 1710 aa35.54■■■■□ 3.28
AGAP3-209ENST00000469901 RIMBP3CA6NJZ7 1639 aa35.53■■■■□ 3.28
AGAP3-209ENST00000469901 RIMBP3BA6NNM3 1639 aa35.53■■■■□ 3.28
AGAP3-209ENST00000469901 RIMBP3Q9UFD9 1639 aa35.53■■■■□ 3.28
AGAP3-209ENST00000469901 TDRD9Q8NDG6 1382 aaKnown RBP35.51■■■■□ 3.28
AGAP3-209ENST00000469901 ARHGEF11O15085 1522 aa35.45■■■■□ 3.27
AGAP3-209ENST00000469901 FBLN2P98095 1184 aa35.44■■■■□ 3.26
AGAP3-209ENST00000469901 SNAPC4Q5SXM2 1469 aa35.38■■■■□ 3.25
AGAP3-209ENST00000469901 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
AGAP3-209ENST00000469901 GRIN2BQ13224 1484 aa35.35■■■■□ 3.25
AGAP3-209ENST00000469901 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
AGAP3-209ENST00000469901 ABCA10Q8WWZ4 1543 aa35.25■■■■□ 3.23
AGAP3-209ENST00000469901 GAPVD1Q14C86 1478 aa35.23■■■■□ 3.23
AGAP3-209ENST00000469901 PBRM1Q86U86 1689 aa35.22■■■■□ 3.23
AGAP3-209ENST00000469901 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
AGAP3-209ENST00000469901 SYNJ1O43426 1573 aa35.21■■■■□ 3.23
AGAP3-209ENST00000469901 WRNQ14191 1432 aaPredicted RBP eCLIP35.17■■■■□ 3.223e-6■■■■□ 25.8
AGAP3-209ENST00000469901 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
AGAP3-209ENST00000469901 CYB5RLQ6IPT4 315 aa35.14■■■■□ 3.22
AGAP3-209ENST00000469901 CLASP1Q7Z460 1538 aa35.14■■■■□ 3.22
AGAP3-209ENST00000469901 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
AGAP3-209ENST00000469901 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
AGAP3-209ENST00000469901 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
AGAP3-209ENST00000469901 ADAMTS12P58397 1594 aa34.9■■■■□ 3.18
AGAP3-209ENST00000469901 GRIN2AQ12879 1464 aa34.89■■■■□ 3.18
AGAP3-209ENST00000469901 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
AGAP3-209ENST00000469901 FHAD1B1AJZ9 1412 aa34.82■■■■□ 3.17
AGAP3-209ENST00000469901 NUP160Q12769 1436 aa34.75■■■■□ 3.15
AGAP3-209ENST00000469901 CEP170Q5SW79 1584 aa34.71■■■■□ 3.15
AGAP3-209ENST00000469901 TRHP20396 242 aaPredicted RBP34.71■■■■□ 3.15
AGAP3-209ENST00000469901 SHROOM2Q13796 1616 aa34.58■■■■□ 3.13
AGAP3-209ENST00000469901 ERCC6L2Q5T890 1561 aa34.53■■■■□ 3.12
AGAP3-209ENST00000469901 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
AGAP3-209ENST00000469901 RUSC2Q8N2Y8 1516 aa34.4■■■■□ 3.1
AGAP3-209ENST00000469901 CUL7Q14999 1698 aa34.4■■■■□ 3.1
AGAP3-209ENST00000469901 PRG4Q92954 1404 aaPredicted RBP34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms