RNA–Protein interactions for RNA: ENST00000399688.7

PAICS-202, Transcript of phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, humanhuman

TSL 1 (best) BASIC

Gene PAICS, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICS-202ENST00000399688 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
PAICS-202ENST00000399688 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
PAICS-202ENST00000399688 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
PAICS-202ENST00000399688 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
PAICS-202ENST00000399688 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
PAICS-202ENST00000399688 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
PAICS-202ENST00000399688 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
PAICS-202ENST00000399688 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
PAICS-202ENST00000399688 HRCP23327 699 aa14.14□□□□□ -0.15
PAICS-202ENST00000399688 NACADO15069 1562 aa13.97□□□□□ -0.17
PAICS-202ENST00000399688 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
PAICS-202ENST00000399688 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
PAICS-202ENST00000399688 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
PAICS-202ENST00000399688 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PAICS-202ENST00000399688 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
PAICS-202ENST00000399688 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
PAICS-202ENST00000399688 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
PAICS-202ENST00000399688 MYT1Q01538 1121 aa13.45□□□□□ -0.26
PAICS-202ENST00000399688 ABCC9O60706 1549 aa13.42□□□□□ -0.26
PAICS-202ENST00000399688 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
PAICS-202ENST00000399688 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
PAICS-202ENST00000399688 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
PAICS-202ENST00000399688 BICRAQ9NZM4 1560 aa13.34□□□□□ -0.27
PAICS-202ENST00000399688 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
PAICS-202ENST00000399688 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
PAICS-202ENST00000399688 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
PAICS-202ENST00000399688 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
PAICS-202ENST00000399688 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
PAICS-202ENST00000399688 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
PAICS-202ENST00000399688 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
PAICS-202ENST00000399688 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
PAICS-202ENST00000399688 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
PAICS-202ENST00000399688 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
PAICS-202ENST00000399688 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
PAICS-202ENST00000399688 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
PAICS-202ENST00000399688 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
PAICS-202ENST00000399688 ADRA2BP18089 450 aa12.92□□□□□ -0.34
PAICS-202ENST00000399688 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
PAICS-202ENST00000399688 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
PAICS-202ENST00000399688 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
PAICS-202ENST00000399688 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
PAICS-202ENST00000399688 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
PAICS-202ENST00000399688 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
PAICS-202ENST00000399688 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
PAICS-202ENST00000399688 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
PAICS-202ENST00000399688 WIZO95785 1651 aa12.73□□□□□ -0.37
PAICS-202ENST00000399688 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
PAICS-202ENST00000399688 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
PAICS-202ENST00000399688 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
PAICS-202ENST00000399688 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
PAICS-202ENST00000399688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
PAICS-202ENST00000399688 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
PAICS-202ENST00000399688 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
PAICS-202ENST00000399688 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
PAICS-202ENST00000399688 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
PAICS-202ENST00000399688 KCNA4P22459 653 aa12.57□□□□□ -0.4
PAICS-202ENST00000399688 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
PAICS-202ENST00000399688 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
PAICS-202ENST00000399688 FOXD1Q16676 465 aa12.52□□□□□ -0.41
PAICS-202ENST00000399688 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.41
PAICS-202ENST00000399688 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
PAICS-202ENST00000399688 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
PAICS-202ENST00000399688 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
PAICS-202ENST00000399688 CCDC88BA6NC98 1476 aa12.42□□□□□ -0.42
PAICS-202ENST00000399688 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
PAICS-202ENST00000399688 MIER1Q8N108 512 aa12.42□□□□□ -0.42
PAICS-202ENST00000399688 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
PAICS-202ENST00000399688 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
PAICS-202ENST00000399688 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
PAICS-202ENST00000399688 CFTRP13569 1480 aa12.38□□□□□ -0.43
PAICS-202ENST00000399688 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PAICS-202ENST00000399688 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
PAICS-202ENST00000399688 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
PAICS-202ENST00000399688 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
PAICS-202ENST00000399688 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
PAICS-202ENST00000399688 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
PAICS-202ENST00000399688 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
PAICS-202ENST00000399688 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
PAICS-202ENST00000399688 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
PAICS-202ENST00000399688 EEA1Q15075 1411 aa12.15□□□□□ -0.46
PAICS-202ENST00000399688 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
PAICS-202ENST00000399688 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
PAICS-202ENST00000399688 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
PAICS-202ENST00000399688 WDR62O43379 1518 aa12.11□□□□□ -0.47
PAICS-202ENST00000399688 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
PAICS-202ENST00000399688 KIF21BO75037 1637 aa12.1□□□□□ -0.47
PAICS-202ENST00000399688 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
PAICS-202ENST00000399688 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
PAICS-202ENST00000399688 CUX1P39880 1505 aa12.07□□□□□ -0.48
PAICS-202ENST00000399688 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
PAICS-202ENST00000399688 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
PAICS-202ENST00000399688 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
PAICS-202ENST00000399688 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
PAICS-202ENST00000399688 CUL7Q14999 1698 aa12.01□□□□□ -0.49
PAICS-202ENST00000399688 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
PAICS-202ENST00000399688 ABCA10Q8WWZ4 1543 aa11.99□□□□□ -0.49
PAICS-202ENST00000399688 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
PAICS-202ENST00000399688 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
PAICS-202ENST00000399688 SOGA1O94964 1423 aa11.97□□□□□ -0.49
PAICS-202ENST00000399688 CEP164Q9UPV0 1460 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms