RNA–Protein interactions for RNA: ENST00000559703.1

TCF12-213, Transcript of transcription factor 12, humanhuman

TSL 5 BASIC

Gene TCF12, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-213ENST00000559703 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
TCF12-213ENST00000559703 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
TCF12-213ENST00000559703 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
TCF12-213ENST00000559703 PHF23Q9BUL5 403 aaPredicted RBP17.43■□□□□ 0.38
TCF12-213ENST00000559703 FOXD1Q16676 465 aa16.45■□□□□ 0.22
TCF12-213ENST00000559703 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.13
TCF12-213ENST00000559703 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
TCF12-213ENST00000559703 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
TCF12-213ENST00000559703 ADRA2BP18089 450 aa15.39■□□□□ 0.05
TCF12-213ENST00000559703 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
TCF12-213ENST00000559703 MSH5O43196 834 aa15.33■□□□□ 0.05
TCF12-213ENST00000559703 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
TCF12-213ENST00000559703 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
TCF12-213ENST00000559703 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
TCF12-213ENST00000559703 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
TCF12-213ENST00000559703 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
TCF12-213ENST00000559703 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
TCF12-213ENST00000559703 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
TCF12-213ENST00000559703 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
TCF12-213ENST00000559703 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
TCF12-213ENST00000559703 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
TCF12-213ENST00000559703 ABCC9O60706 1549 aa13.31□□□□□ -0.28
TCF12-213ENST00000559703 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
TCF12-213ENST00000559703 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
TCF12-213ENST00000559703 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
TCF12-213ENST00000559703 KCNA4P22459 653 aa13.16□□□□□ -0.3
TCF12-213ENST00000559703 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
TCF12-213ENST00000559703 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
TCF12-213ENST00000559703 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
TCF12-213ENST00000559703 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
TCF12-213ENST00000559703 NACADO15069 1562 aa13.01□□□□□ -0.33
TCF12-213ENST00000559703 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
TCF12-213ENST00000559703 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
TCF12-213ENST00000559703 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
TCF12-213ENST00000559703 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
TCF12-213ENST00000559703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■□□□□ 9.7
TCF12-213ENST00000559703 SCRIBQ14160 1630 aa12.71□□□□□ -0.37
TCF12-213ENST00000559703 SHROOM4Q9ULL8 1493 aa12.64□□□□□ -0.39
TCF12-213ENST00000559703 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
TCF12-213ENST00000559703 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
TCF12-213ENST00000559703 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
TCF12-213ENST00000559703 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
TCF12-213ENST00000559703 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
TCF12-213ENST00000559703 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
TCF12-213ENST00000559703 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
TCF12-213ENST00000559703 CAPN15O75808 1086 aa12.4□□□□□ -0.42
TCF12-213ENST00000559703 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
TCF12-213ENST00000559703 CECR2Q9BXF3 1484 aa12.31□□□□□ -0.44
TCF12-213ENST00000559703 DSG3P32926 999 aa12.3□□□□□ -0.44
TCF12-213ENST00000559703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
TCF12-213ENST00000559703 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
TCF12-213ENST00000559703 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
TCF12-213ENST00000559703 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
TCF12-213ENST00000559703 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
TCF12-213ENST00000559703 APLP2Q06481 763 aa12.21□□□□□ -0.45
TCF12-213ENST00000559703 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.45
TCF12-213ENST00000559703 SMARCA4P51532 1647 aa12.21□□□□□ -0.46
TCF12-213ENST00000559703 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
TCF12-213ENST00000559703 ZBTB22O15209 634 aa12.16□□□□□ -0.46
TCF12-213ENST00000559703 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
TCF12-213ENST00000559703 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
TCF12-213ENST00000559703 ABCB7O75027 752 aa12.13□□□□□ -0.47
TCF12-213ENST00000559703 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
TCF12-213ENST00000559703 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
TCF12-213ENST00000559703 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
TCF12-213ENST00000559703 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
TCF12-213ENST00000559703 WIZO95785 1651 aa12.07□□□□□ -0.48
TCF12-213ENST00000559703 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
TCF12-213ENST00000559703 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
TCF12-213ENST00000559703 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
TCF12-213ENST00000559703 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
TCF12-213ENST00000559703 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
TCF12-213ENST00000559703 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
TCF12-213ENST00000559703 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
TCF12-213ENST00000559703 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
TCF12-213ENST00000559703 POLA2Q14181 598 aa11.89□□□□□ -0.51
TCF12-213ENST00000559703 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
TCF12-213ENST00000559703 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
TCF12-213ENST00000559703 POTEHQ6S545 545 aa11.7□□□□□ -0.54
TCF12-213ENST00000559703 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
TCF12-213ENST00000559703 CFTRP13569 1480 aa11.69□□□□□ -0.54
TCF12-213ENST00000559703 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
TCF12-213ENST00000559703 NESP48681 1621 aa11.64□□□□□ -0.55
TCF12-213ENST00000559703 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
TCF12-213ENST00000559703 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
TCF12-213ENST00000559703 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
TCF12-213ENST00000559703 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
TCF12-213ENST00000559703 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
TCF12-213ENST00000559703 PDS5BQ9NTI5 1447 aa11.53□□□□□ -0.56
TCF12-213ENST00000559703 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
TCF12-213ENST00000559703 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
TCF12-213ENST00000559703 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
TCF12-213ENST00000559703 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
TCF12-213ENST00000559703 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
TCF12-213ENST00000559703 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
TCF12-213ENST00000559703 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
TCF12-213ENST00000559703 CUX1P39880 1505 aa11.44□□□□□ -0.58
TCF12-213ENST00000559703 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
TCF12-213ENST00000559703 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
TCF12-213ENST00000559703 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms